RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ACVR1CQ8NER5 493 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 SCAMP5Q8TAC9 235 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 USP33Q8TEY7 942 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 NRG4Q8WWG1 115 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 PPP1R2P1Q96PQ5 205 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 CATSPERBQ9H7T0 1116 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 ZNF212Q9UDV6 495 aa18.9■□□□□ 0.62
CLK1-205ENST00000434813 MEI4A8MW99 385 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 TRIM13O60858 407 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 ANXA9O76027 345 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 HSPA4LO95757 839 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 CST5P28325 142 aaPredicted RBP18.89■□□□□ 0.61
CLK1-205ENST00000434813 THPOP40225 353 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 COPAP53621 1224 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 TSPY1Q01534 308 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 PCID2Q5JVF3 399 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 PKN3Q6P5Z2 889 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 KIRREL3Q8IZU9 778 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 THEM5Q8N1Q8 247 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 KLHDC9Q8NEP7 349 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 HASPINQ8TF76 798 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 MIEF2Q96C03 454 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 ZNF419Q96HQ0 510 aaPredicted RBP18.89■□□□□ 0.61
CLK1-205ENST00000434813 CLPTM1LQ96KA5 538 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 PANX3Q96QZ0 392 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 SIK2Q9H0K1 926 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 GLOD4Q9HC38 313 aa18.89■□□□□ 0.61
CLK1-205ENST00000434813 ARHGEF37A1IGU5 675 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 MAFKO60675 156 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 PAGE1O75459 146 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 CCR1P32246 355 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 SLC5A3P53794 718 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 ARTNQ5T4W7 220 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 VWA5B1Q5TIE3 1220 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 TRIM68Q6AZZ1 485 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 RNF180Q86T96 592 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 ZNF781Q8N8C0 355 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 SPATA22Q8NHS9 363 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 SUSD3Q96L08 255 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 C1QTNF1Q9BXJ1 281 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 OXCT2Q9BYC2 517 aaPredicted RBP18.88■□□□□ 0.61
CLK1-205ENST00000434813 OXSMQ9NWU1 459 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 SLC39A10Q9ULF5 831 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 HTTP42858 3142 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.88■□□□□ 0.61
CLK1-205ENST00000434813 GOLGA8TH3BQL2 631 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 MATN3O15232 486 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 TYMPP19971 482 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 DNAJB1P25685 340 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 PPP2R5DQ14738 602 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 UGP2Q16851 508 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 BTBD8Q5XKL5 378 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 EPGNQ6UW88 154 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 DTX3LQ8TDB6 740 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 PTCD2Q8WV60 388 aaKnown RBP18.88■□□□□ 0.61
CLK1-205ENST00000434813 ACE2Q9BYF1 805 aaPredicted RBP18.88■□□□□ 0.61
CLK1-205ENST00000434813 ANGPTL2Q9UKU9 493 aa18.88■□□□□ 0.61
CLK1-205ENST00000434813 A0A088AWK7 358 aa18.87■□□□□ 0.61
CLK1-205ENST00000434813 TNFRSF10BO14763 440 aa18.87■□□□□ 0.61
CLK1-205ENST00000434813 MT-CYBP00156 380 aaPredicted RBP18.87■□□□□ 0.61
CLK1-205ENST00000434813 ZYG11AQ6WRX3 759 aa18.87■□□□□ 0.61
CLK1-205ENST00000434813 MYLK4Q86YV6 388 aaPredicted RBP18.87■□□□□ 0.61
CLK1-205ENST00000434813 IPMKQ8NFU5 416 aa18.87■□□□□ 0.61
CLK1-205ENST00000434813 COG4Q9H9E3 785 aa18.87■□□□□ 0.61
CLK1-205ENST00000434813 MRM3Q9HC36 420 aaKnown RBP18.87■□□□□ 0.61
CLK1-205ENST00000434813 GPAMQ9HCL2 828 aa18.87■□□□□ 0.61
CLK1-205ENST00000434813 TLK1Q9UKI8 766 aa18.87■□□□□ 0.61
CLK1-205ENST00000434813 NOD1Q9Y239 953 aa18.87■□□□□ 0.61
CLK1-205ENST00000434813 INPP5FQ9Y2H2 1132 aa18.87■□□□□ 0.61
CLK1-205ENST00000434813 MYO16Q9Y6X6 1858 aa18.87■□□□□ 0.61
CLK1-205ENST00000434813 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.86■□□□□ 0.61
CLK1-205ENST00000434813 ITGB1P05556 798 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 PRDX6P30041 224 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 PRKAA2P54646 552 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 GEMP55040 296 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 USP4Q13107 963 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 LPIN1Q14693 890 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 ZRSR2Q15696 482 aaKnown RBP18.86■□□□□ 0.61
CLK1-205ENST00000434813 CFAP157Q5JU67 520 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 C1orf146Q5VVC0 180 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 AFMIDQ63HM1 303 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 CCSAPQ6IQ19 270 aaPredicted RBP18.86■□□□□ 0.61
CLK1-205ENST00000434813 DENND5AQ6IQ26 1287 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 TIGD7Q6NT04 549 aaPredicted RBP18.86■□□□□ 0.61
CLK1-205ENST00000434813 RAPH1Q70E73 1250 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 SPATA2LQ8IUW3 424 aaPredicted RBP18.86■□□□□ 0.61
CLK1-205ENST00000434813 LMNTD2Q8IXW0 634 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 PPHLN1Q8NEY8 458 aaKnown RBP18.86■□□□□ 0.61
CLK1-205ENST00000434813 CASP10Q92851 521 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 CMTM5Q96DZ9 223 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 FCRL2Q96LA5 508 aaPredicted RBP18.86■□□□□ 0.61
CLK1-205ENST00000434813 TSNARE1Q96NA8 513 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 GATA5Q9BWX5 397 aaPredicted RBP18.86■□□□□ 0.61
CLK1-205ENST00000434813 SLC39A8Q9C0K1 460 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 TASP1Q9H6P5 420 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 DNAJB4Q9UDY4 337 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 WASF2Q9Y6W5 498 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 NYNRINQ9P2P1 1898 aaKnown RBP18.86■□□□□ 0.61
CLK1-205ENST00000434813 MYLKQ15746 1914 aa18.86■□□□□ 0.61
CLK1-205ENST00000434813 MSI1O43347 362 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms