RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 C2P06681 752 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 BPGMP07738 259 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 RALBP11234 206 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 EPHA3P29320 983 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 FDFT1P37268 417 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 NME5P56597 212 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 TMEM198Q66K66 360 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 ZNF470Q6ECI4 717 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 RGS9BPQ6ZS82 235 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 ZSCAN18Q8TBC5 510 aaPredicted RBP15.83■□□□□ 0.13
SCARF1-203ENST00000434376 SH3TC2Q8TF17 1288 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 ZNF419Q96HQ0 510 aaPredicted RBP15.83■□□□□ 0.13
SCARF1-203ENST00000434376 NUF2Q9BZD4 464 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 NDE1Q9NXR1 346 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 GMIPQ9P107 970 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 RUVBL2Q9Y230 463 aaKnown RBP15.83■□□□□ 0.13
SCARF1-203ENST00000434376 KCTD3Q9Y597 815 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 USP3Q9Y6I4 520 aa15.83■□□□□ 0.13
SCARF1-203ENST00000434376 MAGEA13PA6NCF6 341 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 AIM2O14862 343 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 PGAM1P18669 254 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 GARSP41250 739 aaKnown RBP15.83■□□□□ 0.12
SCARF1-203ENST00000434376 WDR75Q8IWA0 830 aaKnown RBP15.83■□□□□ 0.12
SCARF1-203ENST00000434376 ENDOVQ8N8Q3 282 aaKnown RBP15.83■□□□□ 0.12
SCARF1-203ENST00000434376 PYDC1Q8WXC3 89 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 SCLYQ96I15 445 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 ELMO2Q96JJ3 720 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 RPRD1AQ96P16 312 aaPredicted RBP15.83■□□□□ 0.12
SCARF1-203ENST00000434376 TUBGCP5Q96RT8 1024 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 OSER1Q9NX31 292 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 FAM159BA6NKW6 160 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 DCLK1O15075 740 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 STAU1O95793 577 aaKnown RBP15.83■□□□□ 0.12
SCARF1-203ENST00000434376 HNRNPLP14866 589 aaKnown RBP eCLIP15.83■□□□□ 0.12
SCARF1-203ENST00000434376 CPA3P15088 417 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 DNAJB2P25686 324 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 PTPRRQ15256 657 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 TEX44Q53QW1 395 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 SPOUT1Q5T280 376 aaKnown RBP15.83■□□□□ 0.12
SCARF1-203ENST00000434376 ZNF781Q8N8C0 355 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 RBM15BQ8NDT2 890 aaKnown RBP15.83■□□□□ 0.12
SCARF1-203ENST00000434376 BLOC1S5Q8TDH9 187 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 RSPH1Q8WYR4 309 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 NMD3Q96D46 503 aaKnown RBP15.83■□□□□ 0.12
SCARF1-203ENST00000434376 GORASP1Q9BQQ3 440 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 CNGB3Q9NQW8 809 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 AK5Q9Y6K8 562 aa15.83■□□□□ 0.12
SCARF1-203ENST00000434376 C9JVG2 144 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 SPAG6O75602 509 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 PRKCHP24723 683 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 ARRB2P32121 409 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 CSHL1Q14406 222 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 CTXN3Q4LDR2 81 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 INTS6LQ5JSJ4 861 aaKnown RBP15.82■□□□□ 0.12
SCARF1-203ENST00000434376 OR52E8Q6IFG1 317 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 SLC26A7Q8TE54 656 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 EZH1Q92800 747 aaPredicted RBP15.82■□□□□ 0.12
SCARF1-203ENST00000434376 TSNARE1Q96NA8 513 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 OLFM3Q96PB7 478 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 C11orf84Q9BUA3 381 aaPredicted RBP15.82■□□□□ 0.12
SCARF1-203ENST00000434376 SENP6Q9GZR1 1112 aaPredicted RBP15.82■□□□□ 0.12
SCARF1-203ENST00000434376 MAF1Q9H063 256 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 LRRC40Q9H9A6 602 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 GTSE1Q9NYZ3 720 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 CDH9Q9ULB4 789 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 APOBEC2Q9Y235 224 aaKnown RBP15.82■□□□□ 0.12
SCARF1-203ENST00000434376 RGPD3A6NKT7 1758 aaPredicted RBP15.82■□□□□ 0.12
SCARF1-203ENST00000434376 RGPD4Q7Z3J3 1758 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 MPSTP25325 297 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 SERPINB6P35237 376 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 SLC12A2P55011 1212 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 FCGRTP55899 365 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 SLC18A2Q05940 514 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 LBRQ14739 615 aaKnown RBP15.82■□□□□ 0.12
SCARF1-203ENST00000434376 ZNF789Q5FWF6 425 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 LRRC8BQ6P9F7 803 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 ARHGAP24Q8N264 748 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 CD99L2Q8TCZ2 262 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 RAET1EQ8TD07 263 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 VPS39Q96JC1 886 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 ANKRD27Q96NW4 1050 aa15.82■□□□□ 0.12
SCARF1-203ENST00000434376 SLC12A8A0AV02 714 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 GABRDO14764 452 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 PQBP1O60828 265 aaKnown RBP15.81■□□□□ 0.12
SCARF1-203ENST00000434376 C1QAP02745 245 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 GP5P40197 560 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 CD86P42081 329 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 DUSP4Q13115 394 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 DPYSQ14117 519 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.81■□□□□ 0.12
SCARF1-203ENST00000434376 ALFQ53S48 1182 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 PRSS55Q6UWB4 352 aaPredicted RBP15.81■□□□□ 0.12
SCARF1-203ENST00000434376 ATP6AP2A0A1C7CYW4 349 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 A8MX80 341 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 ATP6AP2O75787 350 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 SPATA31D3P0C874 917 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 HAPLN1P10915 354 aaPredicted RBP15.81■□□□□ 0.12
SCARF1-203ENST00000434376 DSC2Q02487 901 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 PRPSAP1Q14558 356 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 LAYNQ6UX15 382 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms