RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 TPI1P60174 286 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 CAMK2GQ13555 558 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 PIGHQ14442 188 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 MESDQ14696 234 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 SF3A2Q15428 464 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 DLG2Q15700 870 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 ELF2Q15723 593 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 SMTNL2Q2TAL5 461 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 HNRNPA1L2Q32P51 320 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZFYVE27Q5T4F4 411 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 C9orf64Q5T6V5 341 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 ACBD5Q5T8D3 534 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 TXNRD3NBQ6F5E7 133 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 LAIR1Q6GTX8 287 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 LPCAT2Q7L5N7 544 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 RGL4Q8IZJ4 473 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 RYBPQ8N488 228 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 SH2D3CQ8N5H7 860 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLC35G2Q8TBE7 412 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 CTNNBL1Q8WYA6 563 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 ARHGEF2Q92974 986 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 TOE1Q96GM8 510 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 MRFAP1L1Q96HT8 127 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 CELF6Q96J87 481 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZC3H10Q96K80 434 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 SPACA7Q96KW9 195 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 OMDQ99983 421 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 SNRNP25Q9BV90 132 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 C2orf49Q9BVC5 232 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 GPR174Q9BXC1 333 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 SLC39A8Q9C0K1 460 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 KLC2Q9H0B6 622 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 TNKS2Q9H2K2 1166 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 PARD6AQ9NPB6 346 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 TMEM74BQ9NUR3 256 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 WSB2Q9NYS7 404 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZNF212Q9UDV6 495 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 IP6K2Q9UHH9 426 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 VPS51Q9UID3 782 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 HPCAL4Q9UM19 191 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 NENFQ9UMX5 172 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 NCKAP1Q9Y2A7 1128 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 ZDBF2Q9HCK1 2354 aa5.9□□□□□ -1.46
HMGB3P24-201ENST00000433260 ATXN2Q99700 1313 aaKnown RBP5.9□□□□□ -1.47
HMGB3P24-201ENST00000433260 CKAP5Q14008 2032 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 CUL9Q8IWT3 2517 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 A0A1W2PP55 124 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 SOWAHDA6NJG2 315 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 RNF103O00237 685 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 DFFAO00273 331 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 MID1O15344 667 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 KDELR3O43731 214 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 RAMP2O60895 175 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 RETP07949 1114 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 TMEM253P0C7T8 217 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 ERCC2P18074 760 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 ITPKAP23677 461 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 CD6P30203 668 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 OXTRP30559 389 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 GKP32189 559 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 ACSL1P33121 698 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 NOP2P46087 812 aaKnown RBP5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 MAPKAPK2P49137 400 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 METAP1P53582 386 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 AIF1P55008 147 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 TAS2R40P59535 323 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 ARF5P84085 180 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 NRG1Q02297 640 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZNF33AQ06730 810 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 SCAPQ12770 1279 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 KRT81Q14533 505 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 BOLA3Q53S33 107 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 MANEALQ5VSG8 457 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 DCAF12L1Q5VU92 463 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 PMS2CLQ68D20 193 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZNF776Q68DI1 518 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 TCEAL6Q6IPX3 200 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 RETSATQ6NUM9 610 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 SLC36A4Q6YBV0 504 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 RFX8Q6ZV50 586 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 Q6ZVU0 165 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 NLRP14Q86W24 1093 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 SLC41A1Q8IVJ1 513 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 TP53INP2Q8IXH6 220 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 HDDC3Q8N4P3 179 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 KCTD6Q8NC69 237 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 CHST14Q8NCH0 376 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZNF564Q8TBZ8 553 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 FRS2Q8WU20 508 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 TCEAL3Q969E4 200 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 ANP32EQ9BTT0 268 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 ACE2Q9BYF1 805 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 MIR1-1HGQ9H1L0 117 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 RSPH9Q9H1X1 276 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 MAGEH1Q9H213 219 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 NEUROG2Q9H2A3 272 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 C6orf106Q9H6K1 298 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 CATSPERBQ9H7T0 1116 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms