RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 CDH19Q9H159 772 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 NKX2-4Q9H2Z4 354 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 Q9H521 79 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 TUT1Q9H6E5 874 aaKnown RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 MRPL40Q9NQ50 206 aaKnown RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CASS4Q9NQ75 786 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SNX15Q9NRS6 342 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 WDR70Q9NW82 654 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 C6orf203Q9P0P8 240 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 VPS28Q9UK41 221 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 RPS6KL1Q9Y6S9 549 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 WASF2Q9Y6W5 498 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 TECTAO75443 2155 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CACNA1BQ00975 2339 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 FRYLO94915 3013 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SMIM35A0A1B0GVV1 85 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 C9IYK1 514 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 EEF2KO00418 725 aaKnown RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ZNF195O14628 629 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 DCLK1O15075 740 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SEPT4O43236 478 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 BUD23O43709 281 aaKnown RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ITM2AO43736 263 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 STRNO43815 780 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 MFSD11O43934 449 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CABYRO75952 493 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 HSPA4LO95757 839 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 F9P00740 461 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SRGAP2BP0DMP2 458 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 COX4I1P13073 169 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 UQCRBP14927 111 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 IGFBP4P22692 258 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ADORA2BP29275 332 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SERPINB6P35237 376 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 GRIA1P42261 906 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 NUMBP49757 651 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 GJA9P57773 515 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 COG7P83436 770 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CDC16Q13042 620 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 MED21Q13503 144 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 DPYSQ14117 519 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 HERC3Q15034 1050 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 UGP2Q16851 508 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 C11orf91Q3C1V1 193 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 MFSD14CQ5VZR4 134 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CWF19L1Q69YN2 538 aaKnown RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 C16orf46Q6P387 395 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ZCCHC23Q6ZST2 131 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 RFX8Q6ZV50 586 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 LINC00523Q86TU6 105 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 PDSS2Q86YH6 399 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ZNF567Q8N184 647 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CPSF7Q8N684 471 aaKnown RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CCNYQ8ND76 341 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 RP9Q8TA86 221 aaKnown RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 C18orf25Q96B23 403 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ZNF778Q96MU6 729 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 TTC1Q99614 292 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 B3GNT5Q9BYG0 378 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 IL22Q9GZX6 179 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ILKAPQ9H0C8 392 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ADAMTS10Q9H324 1103 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ZNF395Q9H8N7 513 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 LRRC4Q9HBW1 653 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SLC24A3Q9HC58 644 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 VCX3AQ9NNX9 186 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 PDGFCQ9NRA1 345 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SYBUQ9NX95 663 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 SNTG2Q9NY99 539 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 TMEM216Q9P0N5 145 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 KLHL8Q9P2G9 620 aaPredicted RBP8.86□□□□□ -0.99
GABPB1-205ENST00000429662 CDH22Q9UJ99 828 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 VANGL2Q9ULK5 521 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 RAP2CQ9Y3L5 183 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 MTCH2Q9Y6C9 303 aa8.86□□□□□ -0.99
GABPB1-205ENST00000429662 ZNF292O60281 2723 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 A0A096LPK6 155 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 A0A1W2PQ45 241 aaPredicted RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 A0A1W2PQY0 241 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 RGSL1A5PLK6 1076 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 AP1G1O43747 822 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 LYPLA1O75608 230 aaPredicted RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 ARHGEF15O94989 841 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 MAP3K6O95382 1288 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 TIMP1P01033 207 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 PRKCGP05129 697 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 GNAT1P11488 350 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 MYOGP15173 224 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 RAG1P15918 1043 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 NPR3P17342 541 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 TFE3P19532 575 aaPredicted RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 PSMB4P28070 264 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 HOXA11P31270 313 aaPredicted RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 SERPINB5P36952 375 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 PEX19P40855 299 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 HSPA13P48723 471 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 KPNA2P52292 529 aaKnown RBP8.85□□□□□ -0.99
GABPB1-205ENST00000429662 MTTPP55157 894 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 SLC25A3Q00325 362 aa8.85□□□□□ -0.99
GABPB1-205ENST00000429662 PPIDQ08752 370 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms