RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 CLCN6P51797 869 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 CDO1Q16878 200 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 SLC25A52Q3SY17 297 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 C5orf22Q49AR2 442 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 SOWAHCQ53LP3 525 aaPredicted RBP14.83□□□□□ -0.04
SDC1-204ENST00000429035 MIIPQ5JXC2 388 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 NAA35Q5VZE5 725 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 SEL1L3Q68CR1 1132 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 KDM7AQ6ZMT4 941 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 LRRC69Q6ZNQ3 347 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 ERN2Q76MJ5 926 aaKnown RBP14.83□□□□□ -0.04
SDC1-204ENST00000429035 KANSL1Q7Z3B3 1105 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 ZNF683Q8IZ20 524 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 RYBPQ8N488 228 aaPredicted RBP14.83□□□□□ -0.04
SDC1-204ENST00000429035 OR13H1Q8NG92 308 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 TSC1Q92574 1164 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 TM6SF2Q9BZW4 377 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 CLSTN2Q9H4D0 955 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 ZDHHC6Q9H6R6 413 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 CAAP1Q9H8G2 361 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 DACH1Q9UI36 760 aa14.83□□□□□ -0.04
SDC1-204ENST00000429035 FCF1Q9Y324 198 aaKnown RBP14.83□□□□□ -0.04
SDC1-204ENST00000429035 TRIM38O00635 465 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 MMEP08473 750 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 CDH5P33151 784 aaPredicted RBP14.82□□□□□ -0.04
SDC1-204ENST00000429035 NEK3P51956 506 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 ATP11AP98196 1134 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 ZNF284Q2VY69 593 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 ZNF542PQ5EBM4 170 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 TRNP1Q6NT89 227 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 GCNT7Q6ZNI0 430 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 DPY19L3Q6ZPD9 716 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 PHLDB2Q86SQ0 1253 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 NOP9Q86U38 636 aaKnown RBP14.82□□□□□ -0.04
SDC1-204ENST00000429035 EMC1Q8N766 993 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 TMEM145Q8NBT3 493 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 TMIEQ8NEW7 156 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 CPA5Q8WXQ8 436 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 PGAP3Q96FM1 320 aaPredicted RBP14.82□□□□□ -0.04
SDC1-204ENST00000429035 ZYG11BQ9C0D3 744 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 UCKL1Q9NWZ5 548 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 TAB2Q9NYJ8 693 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 ZFR2Q9UPR6 939 aaKnown RBP14.82□□□□□ -0.04
SDC1-204ENST00000429035 CLCA2Q9UQC9 943 aa14.82□□□□□ -0.04
SDC1-204ENST00000429035 FASNP49327 2511 aaKnown RBP14.81□□□□□ -0.04
SDC1-204ENST00000429035 A0A087WV48 116 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 DRGXA6NNA5 263 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 A6NNZ2 444 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 TLX3O43711 291 aaPredicted RBP14.81□□□□□ -0.04
SDC1-204ENST00000429035 ALPPL2P10696 532 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 DGKAP23743 735 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 SCNN1AP37088 669 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 GABRB2P47870 512 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 SERPINH1P50454 418 aaKnown RBP14.81□□□□□ -0.04
SDC1-204ENST00000429035 CCNHP51946 323 aaPredicted RBP14.81□□□□□ -0.04
SDC1-204ENST00000429035 INSM1Q01101 510 aaPredicted RBP14.81□□□□□ -0.04
SDC1-204ENST00000429035 KCNMA1Q12791 1236 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 ILKQ13418 452 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 PROX2Q3B8N5 592 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 KLHDC7AQ5VTJ3 777 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 RETSATQ6NUM9 610 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 RWDD4Q6NW29 188 aaKnown RBP14.81□□□□□ -0.04
SDC1-204ENST00000429035 NEK5Q6P3R8 708 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 ZNF354CQ86Y25 554 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 OR6K2Q8NGY2 324 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 NUP62CLQ9H1M0 184 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 DNAJC28Q9NX36 388 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 ACTL7AQ9Y615 435 aa14.81□□□□□ -0.04
SDC1-204ENST00000429035 NBEAQ8NFP9 2946 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 CHD5Q8TDI0 1954 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 ASXL3Q9C0F0 2248 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 ILVBLA1L0T0 632 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 F8VZ95 297 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 RRP8O43159 456 aaKnown RBP14.8□□□□□ -0.04
SDC1-204ENST00000429035 PIAS2O75928 621 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 GFPT2O94808 682 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 LSM8O95777 96 aaKnown RBP14.8□□□□□ -0.04
SDC1-204ENST00000429035 MYF5P13349 255 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 ADRB3P13945 408 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 UCHL3P15374 230 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 ACP1P24666 158 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 ITPKBP27987 946 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 NOMO3P69849 1222 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 ARF5P84085 180 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 GNA12Q03113 381 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 C15orf59Q2T9L4 293 aaPredicted RBP14.8□□□□□ -0.04
SDC1-204ENST00000429035 PARS2Q7L3T8 475 aaKnown RBP14.8□□□□□ -0.04
SDC1-204ENST00000429035 SLC22A18ASQ8N1D0 253 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 PCDH20Q8N6Y1 951 aaKnown RBP14.8□□□□□ -0.04
SDC1-204ENST00000429035 EPS8L1Q8TE68 723 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 SLC20A1Q8WUM9 679 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 BAP1Q92560 729 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 NT5C3BQ969T7 300 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 BBC3Q96PG8 261 aaPredicted RBP14.8□□□□□ -0.04
SDC1-204ENST00000429035 HAPLN3Q96S86 360 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 HEPHQ9BQS7 1158 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 C11orf70Q9BRQ4 267 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 HDAC8Q9BY41 377 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 CEP44Q9C0F1 390 aa14.8□□□□□ -0.04
SDC1-204ENST00000429035 SAMSN1Q9NSI8 373 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms