RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 B2RBV5 119 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 SYN3O14994 580 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 FKTNO75072 461 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 HSPA4LO95757 839 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 MOCS2O96007 188 aaPredicted RBP13.9□□□□□ -0.18
THBS3-202ENST00000428962 C2P06681 752 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 TPBGLP0DKB5 382 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 CKBP12277 381 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 PGM1P36871 562 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 ACLYP53396 1101 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 ITGA9Q13797 1035 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 C6orf163Q5TEZ5 329 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 RAPH1Q70E73 1250 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 ZC3HC1Q86WB0 502 aaKnown RBP13.9□□□□□ -0.18
THBS3-202ENST00000428962 TREML1Q86YW5 311 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 OR6Y1Q8NGX8 325 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 SPATA22Q8NHS9 363 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 FATE1Q969F0 183 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 AZIN2Q96A70 460 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 ZNF778Q96MU6 729 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 EBF4Q9BQW3 602 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 FAM167BQ9BTA0 163 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 PRKD2Q9BZL6 878 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 C1orf21Q9H246 121 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 NMUR1Q9HB89 426 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 RBM22Q9NW64 420 aaKnown RBP eCLIP13.9□□□□□ -0.18
THBS3-202ENST00000428962 HS3ST4Q9Y661 456 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 F8W810 466 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 HLA-DQB2P05538 268 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 OR4Q2P0C623 313 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 COL6A2P12110 1019 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 GM2AP17900 193 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 GNAZP19086 355 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 MAGEA11P43364 429 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 OR1G1P47890 313 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 RAP1GDS1P52306 607 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 HK2P52789 917 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 NDST2P52849 883 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 MLLT6P55198 1093 aaPredicted RBP13.9□□□□□ -0.18
THBS3-202ENST00000428962 CFAP157Q5JU67 520 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 TLDC1Q6P9B6 456 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 COLGALT2Q8IYK4 626 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 PLD6Q8N2A8 252 aaKnown RBP13.9□□□□□ -0.18
THBS3-202ENST00000428962 STMN2Q93045 179 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 GLT1D1Q96MS3 346 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 UBE2OQ9C0C9 1292 aaKnown RBP13.9□□□□□ -0.18
THBS3-202ENST00000428962 CAB39LQ9H9S4 337 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 NKX1-2Q9UD57 310 aaPredicted RBP13.9□□□□□ -0.18
THBS3-202ENST00000428962 SLC39A10Q9ULF5 831 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 TCAF1Q9Y4C2 921 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 PCDHB5Q9Y5E4 795 aa13.9□□□□□ -0.18
THBS3-202ENST00000428962 MOXD2PA6NHM9 499 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 G3V2L1 256 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 TRIM13O60858 407 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 ENTPD5O75356 428 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 CIB2O75838 187 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 DDHD2O94830 711 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 MT-CYBP00156 380 aaPredicted RBP13.89□□□□□ -0.19
THBS3-202ENST00000428962 RHOQP17081 205 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 ADRA1AP35348 466 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 PAPOLAP51003 745 aaKnown RBP13.89□□□□□ -0.19
THBS3-202ENST00000428962 KPNA2P52292 529 aaKnown RBP13.89□□□□□ -0.19
THBS3-202ENST00000428962 TBX4P57082 545 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 MXRA7P84157 204 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 TUBB3Q13509 450 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 SLC12A1Q13621 1099 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 USP10Q14694 798 aaKnown RBP13.89□□□□□ -0.19
THBS3-202ENST00000428962 GRM3Q14832 879 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 POU6F1Q14863 301 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 CLLU1OSQ5K130 101 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 RABGAP1LQ5R372 815 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 ACBD5Q5T8D3 534 aaPredicted RBP13.89□□□□□ -0.19
THBS3-202ENST00000428962 RFWD3Q6PCD5 774 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 ZNF280BQ86YH2 543 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.89□□□□□ -0.19
THBS3-202ENST00000428962 TTC8Q8TAM2 541 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 FTHL17Q9BXU8 183 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.89□□□□□ -0.19
THBS3-202ENST00000428962 OLA1Q9NTK5 396 aaKnown RBP13.89□□□□□ -0.19
THBS3-202ENST00000428962 STOML1Q9UBI4 398 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 IPO11Q9UI26 975 aaKnown RBP13.89□□□□□ -0.19
THBS3-202ENST00000428962 NUP205Q92621 2012 aa13.89□□□□□ -0.19
THBS3-202ENST00000428962 E2F8A0AVK6 867 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 PRR5-ARHGAP8B1AHC4 643 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 SIN3BO75182 1162 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 TADA2AO75478 443 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 COL6A1P12109 1028 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 ELNP15502 786 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 CPA2P48052 419 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 IDH3AP50213 366 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 CSRP3P50461 194 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 RENBPP51606 427 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 FAM189BP81408 668 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 ARHGAP8P85298 464 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 IRF9Q00978 393 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 KDSRQ06136 332 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 ASPHQ12797 758 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 THOC5Q13769 683 aaKnown RBP13.88□□□□□ -0.19
THBS3-202ENST00000428962 FSCBQ5H9T9 825 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 KIAA0930Q6ICG6 404 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms