RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 HLA-DQB2P05538 268 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 DLDP09622 509 aaKnown RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 RHOXF2BP0C7M4 288 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 BMP1P13497 986 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 NFKB1P19838 968 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 HSPA9P38646 679 aaKnown RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 ADCY8P40145 1251 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 NNMTP40261 264 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 PTGIRP43119 386 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 TERF1P54274 439 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 SEC13P55735 322 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 RHOAP61586 193 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 ST8SIA6P61647 398 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 BASP1P80723 227 aaKnown RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLC7A5Q01650 507 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 ITKQ08881 620 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLC10A7Q0GE19 358 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 GRSF1Q12849 480 aaKnown RBP eCLIP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 GPS1Q13098 491 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 PTK6Q13882 451 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 HNRNPDQ14103 355 aaKnown RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 PON2Q15165 354 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 MLF2Q15773 248 aaPredicted RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 P3H1Q32P28 736 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 ACCSLQ4AC99 568 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 C22orf39Q6P5X5 142 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 TXNDC11Q6PKC3 985 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 SYDE1Q6ZW31 735 aaPredicted RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 KIAA0907Q7Z7F0 614 aaPredicted RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 METTL3Q86U44 580 aaKnown RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 RNF135Q8IUD6 432 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZNF567Q8N184 647 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 RYBPQ8N488 228 aaPredicted RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 GLIS1Q8NBF1 620 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 CASKIN2Q8WXE0 1202 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 FAM3CQ92520 227 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 UBXN4Q92575 508 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLCO2A1Q92959 643 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 FATE1Q969F0 183 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 TTC17Q96AE7 1141 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 RTP4Q96DX8 246 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZNF419Q96HQ0 510 aaPredicted RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 EXOC2Q96KP1 924 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 VAT1Q99536 393 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 IL12RB2Q99665 862 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 RHOXF2Q9BQY4 288 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 LRRC1Q9BTT6 524 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 TM6SF2Q9BZW4 377 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 TRIM31Q9BZY9 425 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 POLR1EQ9GZS1 481 aaKnown RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 RAB17Q9H0T7 212 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 GBA3Q9H227 469 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 TNKS2Q9H2K2 1166 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 USP29Q9HBJ7 922 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 ELOVL2Q9NXB9 296 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 PAK5Q9P286 719 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 TRHDEQ9UKU6 1024 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 PLA2G4CQ9UP65 541 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLC8A2Q9UPR5 921 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 ERVW-1Q9UQF0 538 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 HS3ST2Q9Y278 367 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 V9GYY5 206 aaPredicted RBP8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 DOCK8Q8NF50 2099 aa8.05□□□□□ -1.12
HMGA1P4-201ENST00000428643 KIF26AQ9ULI4 1882 aaPredicted RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 C5orf60A6NFR6 353 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 EFCAB8A8MWE9 144 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 E7EVH7 732 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 SMAD6O43541 496 aaKnown RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 TIMM44O43615 452 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 GCATO75600 419 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 HEXIM1O94992 359 aaKnown RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 IGSF6O95976 241 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 SRPRAP08240 638 aaKnown RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 SRCP12931 536 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 GLULP15104 373 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 DRD1P21728 446 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 PSMB4P28070 264 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 RPL22P35268 128 aaKnown RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 RECQLP46063 649 aaPredicted RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 LMAN1P49257 510 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 GALK1P51570 392 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 MAXP61244 160 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 GUCY2DQ02846 1103 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLC20A2Q08357 652 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 PRPSAP1Q14558 356 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 ZNF234Q14588 700 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 SLC44A4Q53GD3 710 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 GLE1Q53GS7 698 aaKnown RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 TEX44Q53QW1 395 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 INO80DQ53TQ3 878 aaPredicted RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 ANKRD20A2Q5SQ80 823 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 ATXN7L2Q5T6C5 722 aaPredicted RBP8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 IER5LQ5T953 404 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 FAXCQ5TGI0 409 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 ANKRD20A1Q5TYW2 823 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 ANKRD20A3Q5VUR7 823 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 EGFLAMQ63HQ2 1017 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 TMEM215Q68D42 235 aa8.04□□□□□ -1.12
HMGA1P4-201ENST00000428643 SERPINA13PQ6UXR4 307 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms