RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 NETO1Q8TDF5 533 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 HMCESQ96FZ2 354 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 MRFAP1L1Q96HT8 127 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 OMDQ99983 421 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 LRRC19Q9H756 370 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 CAPN10Q9HC96 672 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 CWC15Q9P013 229 aaKnown RBP17.03■□□□□ 0.32
VRK2-204ENST00000428021 UVRAGQ9P2Y5 699 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 FZD4Q9ULV1 537 aa17.03■□□□□ 0.32
VRK2-204ENST00000428021 FCF1Q9Y324 198 aaKnown RBP17.03■□□□□ 0.32
VRK2-204ENST00000428021 PCDH15Q96QU1 1955 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 CACNA1EQ15878 2313 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 MEI4A8MW99 385 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 TMEM253P0C7T8 217 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 RARAP10276 462 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 CHRNA3P32297 505 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 HCAR3P49019 387 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 LIMK1P53667 647 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 SFSWAPQ12872 951 aaKnown RBP17.02■□□□□ 0.32
VRK2-204ENST00000428021 SERINC3Q13530 473 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 DPYSQ14117 519 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 DPYSL2Q16555 572 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 SMTNL2Q2TAL5 461 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 PARP15Q460N3 678 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 PPP6R3Q5H9R7 873 aaPredicted RBP17.02■□□□□ 0.32
VRK2-204ENST00000428021 LEKR1Q6ZMV7 388 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 DPY19L3Q6ZPD9 716 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 PCDH20Q8N6Y1 951 aaKnown RBP17.02■□□□□ 0.32
VRK2-204ENST00000428021 CEP76Q8TAP6 659 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 CTNNBL1Q8WYA6 563 aaPredicted RBP17.02■□□□□ 0.32
VRK2-204ENST00000428021 VOPP1Q96AW1 172 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 ISG20Q96AZ6 181 aaKnown RBP17.02■□□□□ 0.32
VRK2-204ENST00000428021 CCDC42Q96M95 316 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 ORAI3Q9BRQ5 295 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 ZWILCHQ9H900 591 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 FSCN3Q9NQT6 498 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 CTTNBP2NLQ9P2B4 639 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 CDV3Q9UKY7 258 aaKnown RBP17.02■□□□□ 0.32
VRK2-204ENST00000428021 HPCAL4Q9UM19 191 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 SLC6A14Q9UN76 642 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.02■□□□□ 0.32
VRK2-204ENST00000428021 SLCO1B1Q9Y6L6 691 aa17.02■□□□□ 0.32
VRK2-204ENST00000428021 ADAMTS9Q9P2N4 1935 aa17.02■□□□□ 0.31
VRK2-204ENST00000428021 CDX4O14627 284 aaPredicted RBP17.01■□□□□ 0.31
VRK2-204ENST00000428021 SLC30A4O14863 429 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 IGHV4-34P06331 123 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 SERPINF2P08697 491 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 ERCC2P18074 760 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 ZNF135P52742 658 aaPredicted RBP17.01■□□□□ 0.31
VRK2-204ENST00000428021 NDST2P52849 883 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 ADPRHP54922 357 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 CNTN1Q12860 1018 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 POM121L1PQ3SYA9 428 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 CARD16Q5EG05 197 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 STPG1Q5TH74 334 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 FAM46CQ5VWP2 391 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 AFMIDQ63HM1 303 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 NCEH1Q6PIU2 408 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.01■□□□□ 0.31
VRK2-204ENST00000428021 ARHGAP12Q8IWW6 846 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 PLPP6Q8IY26 295 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 TMIEQ8NEW7 156 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 TEKT4Q8WW24 435 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 HSPH1Q92598 858 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 BIRC7Q96CA5 298 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 CCDC114Q96M63 670 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 EDEM2Q9BV94 578 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 NUSAP1Q9BXS6 441 aaKnown RBP17.01■□□□□ 0.31
VRK2-204ENST00000428021 SLC39A8Q9C0K1 460 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 OSGEPQ9NPF4 335 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 EIF2B4Q9UI10 523 aaKnown RBP17.01■□□□□ 0.31
VRK2-204ENST00000428021 FARP1Q9Y4F1 1045 aaPredicted RBP17.01■□□□□ 0.31
VRK2-204ENST00000428021 WASF2Q9Y6W5 498 aa17.01■□□□□ 0.31
VRK2-204ENST00000428021 ZSCAN5CA6NGD5 496 aaPredicted RBP17■□□□□ 0.31
VRK2-204ENST00000428021 C1QTNF3-AMACRE9PGA6 284 aa17■□□□□ 0.31
VRK2-204ENST00000428021 TM4SF5O14894 197 aa17■□□□□ 0.31
VRK2-204ENST00000428021 BUB1O43683 1085 aa17■□□□□ 0.31
VRK2-204ENST00000428021 PROSCO94903 275 aa17■□□□□ 0.31
VRK2-204ENST00000428021 CFIP05156 583 aa17■□□□□ 0.31
VRK2-204ENST00000428021 SDHBP21912 280 aa17■□□□□ 0.31
VRK2-204ENST00000428021 DNA2P51530 1060 aa17■□□□□ 0.31
VRK2-204ENST00000428021 GEMIN4P57678 1058 aaKnown RBP17■□□□□ 0.31
VRK2-204ENST00000428021 PUM1Q14671 1186 aaKnown RBP eCLIP17■□□□□ 0.31
VRK2-204ENST00000428021 ARSIQ5FYB1 569 aa17■□□□□ 0.31
VRK2-204ENST00000428021 AGBL4Q5VU57 503 aa17■□□□□ 0.31
VRK2-204ENST00000428021 KIAA0895LQ68EN5 471 aa17■□□□□ 0.31
VRK2-204ENST00000428021 POLNQ7Z5Q5 900 aa17■□□□□ 0.31
VRK2-204ENST00000428021 RABEPKQ7Z6M1 372 aa17■□□□□ 0.31
VRK2-204ENST00000428021 NPWQ8N729 165 aa17■□□□□ 0.31
VRK2-204ENST00000428021 NETO2Q8NC67 525 aa17■□□□□ 0.31
VRK2-204ENST00000428021 OR2T34Q8NGX1 318 aa17■□□□□ 0.31
VRK2-204ENST00000428021 OR14C36Q8NHC7 312 aa17■□□□□ 0.31
VRK2-204ENST00000428021 TSC1Q92574 1164 aa17■□□□□ 0.31
VRK2-204ENST00000428021 ARRDC3Q96B67 414 aa17■□□□□ 0.31
VRK2-204ENST00000428021 CELF6Q96J87 481 aaKnown RBP17■□□□□ 0.31
VRK2-204ENST00000428021 TM6SF2Q9BZW4 377 aa17■□□□□ 0.31
VRK2-204ENST00000428021 MIR1-1HGQ9H1L0 117 aa17■□□□□ 0.31
VRK2-204ENST00000428021 STAU2Q9NUL3 570 aaKnown RBP eCLIP17■□□□□ 0.31
VRK2-204ENST00000428021 DONSONQ9NYP3 566 aa17■□□□□ 0.31
VRK2-204ENST00000428021 IL36AQ9UHA7 158 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms