RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 ZNF33AQ06730 810 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 DPYSL3Q14195 570 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 RSPO4Q2I0M5 234 aaPredicted RBP16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 ZNF776Q68DI1 518 aaPredicted RBP16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 TCEAL6Q6IPX3 200 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 SYT10Q6XYQ8 523 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 LEKR1Q6ZMV7 388 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 NPWQ8N729 165 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 FAM71BQ8TC56 605 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 RAPGEF5Q92565 580 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 TSC1Q92574 1164 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 TCEAL3Q969E4 200 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 HSPA12BQ96MM6 686 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 FBRSQ9HAH7 460 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 ATP13A1Q9HD20 1204 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 USP36Q9P275 1121 aaKnown RBP16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 LCMT1Q9UIC8 334 aa16.03■□□□□ 0.16
CLK3P2-201ENST00000427566 MACROD2A1Z1Q3 448 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 BTNL10A8MVZ5 291 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 PATE3B3GLJ2 98 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 FGF10O15520 208 aaPredicted RBP16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 SMAD6O43541 496 aaKnown RBP16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 GDF9O60383 454 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 RAMP2O60895 175 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 CD160O95971 181 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 ITPKAP23677 461 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 OXTRP30559 389 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 HTR7P34969 479 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 HCAR3P49019 387 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 NAP1L1P55209 391 aaKnown RBP16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 ARF5P84085 180 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 KRT81Q14533 505 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 POLD3Q15054 466 aaPredicted RBP16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 TTC31Q49AM3 519 aaPredicted RBP16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 IL31Q6EBC2 164 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 METTL3Q86U44 580 aaKnown RBP16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 MMAAQ8IVH4 418 aaKnown RBP16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 UMODL1-AS1Q8N2C9 162 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 DCAF4L2Q8NA75 395 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 KCTD6Q8NC69 237 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 HMCESQ96FZ2 354 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 ACE2Q9BYF1 805 aaPredicted RBP16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 SLC39A8Q9C0K1 460 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 MAGEH1Q9H213 219 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 RETREG1Q9H6L5 497 aa16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 WSB2Q9NYS7 404 aaPredicted RBP16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 CDV3Q9UKY7 258 aaKnown RBP16.02■□□□□ 0.15
CLK3P2-201ENST00000427566 FRYLO94915 3013 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 GON4LQ3T8J9 2241 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 TARSL2A2RTX5 802 aaKnown RBP16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 MEI4A8MW99 385 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 PRR5-ARHGAP8B1AHC4 643 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 RASA4BC9J798 803 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 H3BRJ5 948 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 CTIFO43310 598 aaKnown RBP16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 RASA4O43374 803 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 SPOPO43791 374 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 KRT7P08729 469 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 SRCP12931 536 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 ARL4AP40617 200 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 SLC1A1P43005 524 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 PSMD8P48556 350 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 MARCKSL1P49006 195 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 ARHGAP8P85298 464 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 PLA2G2CQ5R387 149 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 ZFYVE27Q5T4F4 411 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 C9orf64Q5T6V5 341 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 ZNF783Q6ZMS7 281 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 DAAM2Q86T65 1068 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 SLC41A1Q8IVJ1 513 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 ARHGAP12Q8IWW6 846 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 STK40Q8N2I9 435 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 KDM1BQ8NB78 822 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 FRS2Q8WU20 508 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 PTPRN2Q92932 1015 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 RMDN1Q96DB5 314 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 C2orf49Q9BVC5 232 aaPredicted RBP16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 CALN1Q9BXU9 219 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 LRRC19Q9H756 370 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 TMEM74BQ9NUR3 256 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 NCKAP1Q9Y2A7 1128 aa16.01■□□□□ 0.15
CLK3P2-201ENST00000427566 GRID2IPA4D2P6 1211 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 C3orf70A6NLC5 250 aaPredicted RBP16■□□□□ 0.15
CLK3P2-201ENST00000427566 KHNYNO15037 678 aaKnown RBP16■□□□□ 0.15
CLK3P2-201ENST00000427566 KDELR1P24390 212 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 MAOBP27338 520 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 KIF5AQ12840 1032 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 DLG2Q15700 870 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 SPDYCQ5MJ68 293 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 C11orf63Q6NUN7 778 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 ARHGAP36Q6ZRI8 547 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 ZNF354CQ86Y25 554 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 SYT12Q8IV01 421 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 ATP11CQ8NB49 1132 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 PCDH19Q8TAB3 1148 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 SNX19Q92543 992 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 MIR1-1HGQ9H1L0 117 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 RSPH9Q9H1X1 276 aaPredicted RBP16■□□□□ 0.15
CLK3P2-201ENST00000427566 L2HGDHQ9H9P8 463 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms