RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PARVAQ9NVD7 372 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 AIPL1Q9NZN9 384 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 IL36AQ9UHA7 158 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 HPCAL4Q9UM19 191 aa18.82■□□□□ 0.6
GPC1-205ENST00000427506 GOLGA6L19H0YKK7 550 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 CREB3O43889 395 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 RAMP2O60895 175 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 SPINK2P20155 84 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 EPHB2P29323 1055 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 CTSKP43235 329 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 ARF5P84085 180 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 FANCCQ00597 558 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 SCAPQ12770 1279 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 ARSIQ5FYB1 569 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 KCNT1Q5JUK3 1230 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 PPP1R15BQ5SWA1 713 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 AGBL4Q5VU57 503 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 DPY19L3Q6ZPD9 716 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 PCDH20Q8N6Y1 951 aaKnown RBP18.81■□□□□ 0.6
GPC1-205ENST00000427506 ARHGEF2Q92974 986 aaKnown RBP18.81■□□□□ 0.6
GPC1-205ENST00000427506 FAM131CQ96AQ9 280 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 PPP1R16AQ96I34 528 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 MAGEH1Q9H213 219 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 FCF1Q9Y324 198 aaKnown RBP18.81■□□□□ 0.6
GPC1-205ENST00000427506 PCDHGB2Q9Y5G2 931 aa18.81■□□□□ 0.6
GPC1-205ENST00000427506 H0Y8X5 98 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 FLRT2O43155 660 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 ATMINO43313 823 aaPredicted RBP18.8■□□□□ 0.6
GPC1-205ENST00000427506 DFNA5O60443 496 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 TOP3BO95985 862 aaKnown RBP18.8■□□□□ 0.6
GPC1-205ENST00000427506 PSMA2P25787 234 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 L1CAMP32004 1257 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 CCT8P50990 548 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 GEMIN4P57678 1058 aaKnown RBP18.8■□□□□ 0.6
GPC1-205ENST00000427506 MAMLD1Q13495 774 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 POLD3Q15054 466 aaPredicted RBP18.8■□□□□ 0.6
GPC1-205ENST00000427506 CARD16Q5EG05 197 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 ZNF571Q7Z3V5 609 aaPredicted RBP18.8■□□□□ 0.6
GPC1-205ENST00000427506 TMC6Q7Z403 805 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 RYBPQ8N488 228 aaPredicted RBP18.8■□□□□ 0.6
GPC1-205ENST00000427506 RHBDD1Q8TEB9 315 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 ARRDC3Q96B67 414 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 EPAS1Q99814 870 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 HEPHQ9BQS7 1158 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 EDEM3Q9BZQ6 932 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 PREBQ9HCU5 417 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 PCOLCE2Q9UKZ9 415 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 FZD10Q9ULW2 581 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 ACTL7AQ9Y615 435 aa18.8■□□□□ 0.6
GPC1-205ENST00000427506 WNT9AO14904 365 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 LATO43561 262 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 LEFTY1O75610 366 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 FTLP02792 175 aaPredicted RBP18.79■□□□□ 0.6
GPC1-205ENST00000427506 WNT1P04628 370 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 SKILP12757 684 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 PRKCIP41743 596 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 AIF1P55008 147 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 UBASH3AP57075 661 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 IL9RQ01113 521 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 ZNF423Q2M1K9 1284 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 PIP5KL1Q5T9C9 394 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 E4F1Q66K89 784 aaPredicted RBP18.79■□□□□ 0.6
GPC1-205ENST00000427506 NAPEPLDQ6IQ20 393 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 LEKR1Q6ZMV7 388 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 TRIM69Q86WT6 500 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 DNAAF5Q86Y56 855 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 SCNM1Q9BWG6 230 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 TM6SF2Q9BZW4 377 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 TTYH3Q9C0H2 523 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 NEU3Q9UQ49 428 aa18.79■□□□□ 0.6
GPC1-205ENST00000427506 CACNA1EQ15878 2313 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 C10orf142B7Z368 130 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 HYAL3O43820 417 aaPredicted RBP18.78■□□□□ 0.6
GPC1-205ENST00000427506 RNGTTO60942 597 aaKnown RBP18.78■□□□□ 0.6
GPC1-205ENST00000427506 ZNF821O75541 412 aaPredicted RBP18.78■□□□□ 0.6
GPC1-205ENST00000427506 TRIM16O95361 564 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 GZMAP12544 262 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 NUDT1P36639 197 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 CCNHP51946 323 aaPredicted RBP18.78■□□□□ 0.6
GPC1-205ENST00000427506 TAS2R38P59533 333 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 OGDHQ02218 1023 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 STAT4Q14765 748 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 SETMARQ53H47 684 aaPredicted RBP18.78■□□□□ 0.6
GPC1-205ENST00000427506 TDRD12Q587J7 1177 aaKnown RBP18.78■□□□□ 0.6
GPC1-205ENST00000427506 PRAMEF14Q5SWL7 426 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 PLEKHA7Q6IQ23 1121 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 ERN2Q76MJ5 926 aaKnown RBP18.78■□□□□ 0.6
GPC1-205ENST00000427506 RTL3Q8N8U3 475 aaKnown RBP18.78■□□□□ 0.6
GPC1-205ENST00000427506 ZDHHC6Q9H6R6 413 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 CATSPERBQ9H7T0 1116 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 GDF3Q9NR23 364 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 ARHGAP20Q9P2F6 1191 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 HECAQ9UBI9 543 aaPredicted RBP18.78■□□□□ 0.6
GPC1-205ENST00000427506 CNOT8Q9UFF9 292 aaKnown RBP18.78■□□□□ 0.6
GPC1-205ENST00000427506 DMTF1Q9Y222 760 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 DOCK4Q8N1I0 1966 aa18.78■□□□□ 0.6
GPC1-205ENST00000427506 PLXNA2O75051 1894 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 CXorf51AA0A1B0GTR3 108 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 A0A1W2PR77 199 aa18.77■□□□□ 0.6
GPC1-205ENST00000427506 TLR4O00206 839 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms