RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 GRIN3AQ8TCU5 1115 aa15□□□□□ -0.01
PDAP1-202ENST00000426447 GLMNQ92990 594 aa15□□□□□ -0.01
PDAP1-202ENST00000426447 C2orf49Q9BVC5 232 aaPredicted RBP15□□□□□ -0.01
PDAP1-202ENST00000426447 TRIM4Q9C037 500 aa15□□□□□ -0.01
PDAP1-202ENST00000426447 SYNDIG1Q9H7V2 258 aa15□□□□□ -0.01
PDAP1-202ENST00000426447 IL36AQ9UHA7 158 aa15□□□□□ -0.01
PDAP1-202ENST00000426447 SALL4Q9UJQ4 1053 aa15□□□□□ -0.01
PDAP1-202ENST00000426447 HS3ST2Q9Y278 367 aa15□□□□□ -0.01
PDAP1-202ENST00000426447 OR51B4Q9Y5P0 310 aa15□□□□□ -0.01
PDAP1-202ENST00000426447 SPTY2D1-AS1A0A0U1RR47 76 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 EME2A4GXA9 379 aaPredicted RBP14.99□□□□□ -0.01
PDAP1-202ENST00000426447 POM121BA6NF01 834 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 CDRT15L2A8MXV6 281 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 K7ERQ8 282 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 MUSKO15146 869 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 LZTS3O60299 673 aaPredicted RBP14.99□□□□□ -0.01
PDAP1-202ENST00000426447 TCEA3O75764 348 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 LETM1O95202 739 aaPredicted RBP14.99□□□□□ -0.01
PDAP1-202ENST00000426447 GJB6O95452 261 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 NME1P15531 152 aaKnown RBP14.99□□□□□ -0.01
PDAP1-202ENST00000426447 JUNDP17535 347 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 RRM1P23921 792 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 RABIFP47224 123 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 CDH4P55283 916 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 SKOR1P84550 965 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 NME3Q13232 169 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 CLN3Q13286 438 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 SGCGQ13326 291 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 MTA1Q13330 715 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 PDE1CQ14123 709 aaPredicted RBP14.99□□□□□ -0.01
PDAP1-202ENST00000426447 TAF5Q15542 800 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 CCDC40Q4G0X9 1142 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 C6orf132Q5T0Z8 1188 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 USP53Q70EK8 1073 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 TMEM110Q86TL2 294 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 HSCBQ8IWL3 235 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 DEFB106AQ8N104 65 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 CHST14Q8NCH0 376 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 PRR11Q96HE9 360 aaPredicted RBP14.99□□□□□ -0.01
PDAP1-202ENST00000426447 HDAC8Q9BY41 377 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 SIK2Q9H0K1 926 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 TNKS2Q9H2K2 1166 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 TBC1D30Q9Y2I9 924 aa14.99□□□□□ -0.01
PDAP1-202ENST00000426447 ATMQ13315 3056 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 TRIM49BA6NDI0 452 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 FPGTO14772 594 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 SNAP91O60641 907 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 ENDOD1O94919 500 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 RHOCP08134 193 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 GGCXP38435 758 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 MLLT3P42568 568 aaPredicted RBP14.98□□□□□ -0.01
PDAP1-202ENST00000426447 IRAK1P51617 712 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 NEK3P51956 506 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 PMS1P54277 932 aaKnown RBP14.98□□□□□ -0.01
PDAP1-202ENST00000426447 GCNT1Q02742 428 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 LRRC63Q05C16 580 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 PNOCQ13519 176 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 EIF4EBP2Q13542 120 aaPredicted RBP14.98□□□□□ -0.01
PDAP1-202ENST00000426447 TMEM259Q4ZIN3 620 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 ZNF658Q5TYW1 1059 aaPredicted RBP14.98□□□□□ -0.01
PDAP1-202ENST00000426447 KIAA1161Q6NSJ0 714 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 KYAT3Q6YP21 454 aaKnown RBP14.98□□□□□ -0.01
PDAP1-202ENST00000426447 ARHGEF19Q8IW93 802 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 EXD3Q8N9H8 876 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 EHBP1Q8NDI1 1231 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 WDR48Q8TAF3 677 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 BTN2A2Q8WVV5 523 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 SNX21Q969T3 373 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 SPASTQ9UBP0 616 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 HS3ST4Q9Y661 456 aa14.98□□□□□ -0.01
PDAP1-202ENST00000426447 COL6A6A6NMZ7 2263 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 MAST4O15021 2626 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 MYO18BQ8IUG5 2567 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 CCDC187A0A096LP49 1063 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 PMS2P1A4D2B8 440 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 RNF103O00237 685 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 TPP1O14773 563 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 PMM2O15305 246 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 THAP12O43422 761 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 SMAD6O43541 496 aaKnown RBP14.97□□□□□ -0.01
PDAP1-202ENST00000426447 LEFTY1O75610 366 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 GRAP2O75791 330 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 DNA2P51530 1060 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 CLCN6P51797 869 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 SPIDRQ14159 915 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 DRAP1Q14919 205 aaPredicted RBP14.97□□□□□ -0.01
PDAP1-202ENST00000426447 EFHC1Q5JVL4 640 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 PERM1Q5SV97 790 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 LINGO4Q6UY18 593 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 C14orf80Q86SX3 495 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 CLEC14AQ86T13 490 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 LMO3Q8TAP4 145 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 ZNF606Q8WXB4 792 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 NAT6Q93015 286 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 GTPBP4Q9BZE4 634 aaKnown RBP14.97□□□□□ -0.01
PDAP1-202ENST00000426447 GOLPH3LQ9H4A5 285 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 VPS51Q9UID3 782 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 KLF15Q9UIH9 416 aa14.97□□□□□ -0.01
PDAP1-202ENST00000426447 A0A1W2PQ27 194 aa14.96□□□□□ -0.01
PDAP1-202ENST00000426447 A0A1W2PQ64 194 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms