RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 FGFR3P22607 806 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 MAGEA12P43365 314 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 MPP1Q00013 466 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 ZBTB6Q15916 424 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 OLFML2BQ68BL8 750 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 KLHDC10Q6PID8 442 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 GK5Q6ZS86 529 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 OSTM1Q86WC4 334 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 METTL25Q8N6Q8 603 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 LINC01465Q8N7H1 131 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 B3GALNT2Q8NCR0 500 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 SPATA22Q8NHS9 363 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 ATP6V1E2Q96A05 226 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 PRICKLE1Q96MT3 831 aaPredicted RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 NPY6RQ99463 290 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 FTHL17Q9BXU8 183 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 DUSP16Q9BY84 665 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 ULBP1Q9BZM6 244 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 CASS4Q9NQ75 786 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 GPRC5DQ9NZD1 345 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 CACNG4Q9UBN1 327 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 GTF2IRD1Q9UHL9 959 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 ACOT9Q9Y305 439 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 COPG1Q9Y678 874 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 PSME4Q14997 1843 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 SIP14410 1827 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 DNAJC25-GNG10A0A024R161 153 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 ASB14A6NK59 587 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 KCNU1A8MYU2 1149 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 DAB1O75553 588 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 RNASEH2AO75792 299 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 FAM58BPP0C7Q3 252 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 HDCP19113 662 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 IGFBP6P24592 240 aaPredicted RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 RGS2P41220 211 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 TAF6P49848 677 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 MYBPC1Q00872 1141 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 DPYSQ14117 519 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 PTK2BQ14289 1009 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 DGKDQ16760 1214 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 MYLK3Q32MK0 819 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 SH2D4BQ5SQS7 431 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 IL31Q6EBC2 164 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 ZNF280DQ6N043 979 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 RWDD4Q6NW29 188 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 AMIGO2Q86SJ2 522 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 EGFL6Q8IUX8 553 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 PGAM4Q8N0Y7 254 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 IPMKQ8NFU5 416 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 ZFP28Q8NHY6 868 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 KLHL32Q96NJ5 620 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 MRPL1Q9BYD6 325 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 SIK2Q9H0K1 926 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 ATXN3LQ9H3M9 355 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 FAM124BQ9H5Z6 455 aaPredicted RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 PIN4Q9Y237 131 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 TIMM13Q9Y5L4 95 aaPredicted RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 A0A1B0GTW7 788 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 YJEFN3A6XGL0 299 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 I6L893 689 aaPredicted RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 H2AFYO75367 372 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 TNFAIP8O95379 198 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 PYGLP06737 847 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 SBK3P0C264 359 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 USP17L7P0C7H9 530 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 YBX3P16989 372 aaKnown RBP eCLIP7.64□□□□□ -1.195e-7■■□□□ 12
SMARCC1-202ENST00000425518 NPR3P17342 541 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 NPY2RP49146 381 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 CSE1LP55060 971 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 IL23RQ5VWK5 629 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 WSCD1Q658N2 575 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 ZFP1Q6P2D0 407 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 CYP2R1Q6VVX0 501 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 B3GNT6Q6ZMB0 384 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 RPS27LQ71UM5 84 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 ZC3HC1Q86WB0 502 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 PNPLA1Q8N8W4 532 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 ADCY4Q8NFM4 1077 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 C16orf70Q9BSU1 422 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 IL22Q9GZX6 179 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 TRPV6Q9H1D0 765 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 CHST12Q9NRB3 414 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 RIMS3Q9UJD0 308 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 RAB26Q9ULW5 256 aa7.64□□□□□ -1.19
SMARCC1-202ENST00000425518 MGAMO43451 1857 aa7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 MAGEB16A2A368 324 aa7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 H3BSA7 217 aa7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 DFFAO00273 331 aa7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 HNRNPRO43390 633 aaKnown RBP7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 MT-CYBP00156 380 aaPredicted RBP7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 APOA4P06727 396 aa7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 PTPN1P18031 435 aaKnown RBP7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 GABRB3P28472 473 aa7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 SCNN1AP37088 669 aa7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 PLK1P53350 603 aa7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 SOX4Q06945 474 aaPredicted RBP7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 RALGDSQ12967 914 aa7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 PDAP1Q13442 181 aaKnown RBP7.63□□□□□ -1.19
SMARCC1-202ENST00000425518 SLC12A1Q13621 1099 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms