RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 LONRF2Q1L5Z9 754 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 GLRA4Q5JXX5 417 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 GKAP1Q5VSY0 366 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 FCRL6Q6DN72 434 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 KRBA2Q6ZNG9 492 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 C16orf86Q6ZW13 317 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 NEK11Q8NG66 645 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CEP70Q8NHQ1 597 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 DNAJB14Q8TBM8 379 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ELMO2Q96JJ3 720 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 SERPINB11Q96P15 392 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 FEM1AQ9BSK4 669 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CCDC28BQ9BUN5 200 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TARS2Q9BW92 718 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ING2Q9H160 280 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 EBF3Q9H4W6 596 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CXorf56Q9H5V9 222 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 FZD3Q9NPG1 666 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 BATF3Q9NR55 127 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 PNO1Q9NRX1 252 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ARGLU1Q9NWB6 273 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 COPG2Q9UBF2 871 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 EIF2B4Q9UI10 523 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TLK1Q9UKI8 766 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 AGO2Q9UKV8 859 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CAPN7Q9Y6W3 813 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ERICH4A6NGS2 130 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 GOLGA8JA6NMD2 632 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 M0QYV0 167 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TXNDC9O14530 226 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 RAD51CO43502 376 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 KIF5CO60282 957 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 EIF2S1P05198 315 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ADRB1P08588 477 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 STX2P32856 288 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 GUCY1A2P33402 732 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TNFSF9P41273 254 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 SULT1E1P49888 294 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ANXA11P50995 505 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 NEK3P51956 506 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ATXN1P54253 815 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 PURAQ00577 322 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 SLC14A1Q13336 389 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TTLL9Q3SXZ7 439 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ARMC3Q5W041 872 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 APOA5Q6Q788 366 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 C15orf52Q6ZUT6 534 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 WDR53Q7Z5U6 358 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ECHDC2Q86YB7 292 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 LIX1LQ8IVB5 337 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 LGI2Q8N0V4 545 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 MPP5Q8N3R9 675 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 MDM1Q8TC05 714 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 METTL6Q8TCB7 284 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ZNF274Q96GC6 653 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ZFRQ96KR1 1074 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 RUNDC3BQ96NL0 473 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 EGFL8Q99944 293 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CFHR5Q9BXR6 569 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 AGXT2Q9BYV1 514 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 NEK6Q9HC98 313 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 IFT80Q9P2H3 777 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 RBPJLQ9UBG7 517 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 APOBEC3BQ9UH17 382 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ARHGAP26Q9UNA1 814 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 PSME4Q14997 1843 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 UBR5O95071 2799 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 MYO10Q9HD67 2058 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 C16orf96A6NNT2 1141 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 STMND1H3BQB6 276 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 DDX3XO00571 662 aaKnown RBP eCLIP3.61□□□□□ -1.832e-24■■□□□ 11.7
TOP2A-201ENST00000423485 GLSO94925 669 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 C4BPAP04003 597 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 SERPINF2P08697 491 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CPA3P15088 417 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ELAVL4P26378 380 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CST5P28325 142 aaPredicted RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 SOX11P35716 441 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 NSFP46459 744 aaKnown RBP3.61□□□□□ -1.83
TOP2A-201ENST00000423485 PLP2Q04941 152 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 STX4Q12846 297 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TRIM14Q14142 442 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 CMPK2Q5EBM0 449 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 DCAF12L1Q5VU92 463 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 HSDL2Q6YN16 418 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 C17orf107Q6ZR85 190 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 IKBIPQ70UQ0 350 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 RAB11FIP2Q7L804 512 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.61□□□□□ -1.834e-6■□□□□ 10.7
TOP2A-201ENST00000423485 KLHDC4Q8TBB5 520 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 AUTS2Q8WXX7 1259 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ITFG2Q969R8 447 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 MED8Q96G25 268 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TIMD4Q96H15 378 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TMEM237Q96Q45 408 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 RIT2Q99578 217 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 SLC39A3Q9BRY0 314 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 TRMOQ9BU70 441 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 ADGRE3Q9BY15 652 aa3.61□□□□□ -1.83
TOP2A-201ENST00000423485 MFRPQ9BY79 579 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms