RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 TRAPPC12Q8WVT3 735 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 SCYL1Q96KG9 808 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 SUCOQ9UBS9 1254 aaKnown RBP16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 SLC8A2Q9UPR5 921 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 H2AFYO75367 372 aaKnown RBP16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 SEC24DO94855 1032 aaPredicted RBP16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 OGFOD2Q6N063 350 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 LAYNQ6UX15 382 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 ACOT1Q86TX2 421 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 RNF169Q8NCN4 708 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 KCTD4Q8WVF5 259 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 VPS39Q96JC1 886 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 C1QTNF1Q9BXJ1 281 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 ARMC7Q9H6L4 198 aa16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 IPO11Q9UI26 975 aaKnown RBP16.92■□□□□ 0.3
NPC1L1-203ENST00000423141 SAC3D1A6NKF1 404 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 ZNF839A8K0R7 811 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 XPOTO43592 962 aaKnown RBP16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 UGT1A6P19224 532 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 PHEXP78562 749 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 RELAQ04206 551 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 GRM3Q14832 879 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 SOWAHAQ2M3V2 549 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 ZBED5Q49AG3 693 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 PITRM1Q5JRX3 1037 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 LYSMD3Q7Z3D4 306 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 FAM131BQ86XD5 332 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 CCNYL1Q8N7R7 359 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 TFAP2CQ92754 450 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 OMDQ99983 421 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 APOL2Q9BQE5 337 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 CYP3A43Q9HB55 503 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 TRPC7Q9HCX4 862 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 IARS2Q9NSE4 1012 aaKnown RBP16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 ZNF638Q14966 1978 aaKnown RBP16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 A0A1W2PPW3 197 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 ACKR2O00590 384 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 FBP2O00757 339 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 PEX10O60683 326 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 FARP2O94887 1054 aaPredicted RBP16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 CLIC3O95833 236 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 STAG3L1P0CL83 205 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 ZNF460Q14592 562 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 C6orf10Q5SRN2 563 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 CERCAMQ5T4B2 595 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 IER5Q5VY09 327 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 KDM1BQ8NB78 822 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 SLC35B4Q969S0 331 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 SLC39A3Q9BRY0 314 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 NT5C1AQ9BXI3 368 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 IL22Q9GZX6 179 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 NAA50Q9GZZ1 169 aaKnown RBP16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 VPS45Q9NRW7 570 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 SMOXQ9NWM0 555 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 SELENONQ9NZV5 590 aa16.91■□□□□ 0.3
NPC1L1-203ENST00000423141 ZNF487B1APH4 448 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 NRP1O14786 923 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 TRIM24O15164 1050 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 SERPINB7O75635 380 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 ADSLP30566 484 aaPredicted RBP16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 GSTM4Q03013 218 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 PRKCQQ04759 706 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 INCA1Q0VD86 236 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 STXBP2Q15833 593 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 FGD3Q5JSP0 725 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 C11orf84Q9BUA3 381 aaPredicted RBP16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 HIPK3Q9H422 1215 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 LRRC40Q9H9A6 602 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 CHRAC1Q9NRG0 131 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 CACNA2D2Q9NY47 1150 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 VANGL2Q9ULK5 521 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 TCRBV3S1A0A5B6 114 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 FAM155AB1AL88 458 aaPredicted RBP16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 H3BMQ9 156 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 DLGAP1O14490 977 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 SDHDO14521 159 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 DLX3O60479 287 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 CBFA2T3O75081 653 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 IL18RAPO95256 599 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 MCF2P10911 925 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 SLC7A1P30825 629 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 ESRRGP62508 458 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 IFRD2Q12894 506 aaPredicted RBP16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 PKDCCQ504Y2 493 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 FKBP1CQ5VVH2 108 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 PID1Q7Z2X4 250 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 TMEM110Q86TL2 294 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 TMEM135Q86UB9 458 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 KCNMB4Q86W47 210 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 FSTL5Q8N475 847 aaPredicted RBP16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 DNAAF3Q8N9W5 541 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 THAP11Q96EK4 314 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 COX4I2Q96KJ9 171 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 COG8Q96MW5 612 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 PPP1R16BQ96T49 567 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 UNC93B1Q9H1C4 597 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 PRDM12Q9H4Q4 367 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 RPF2Q9H7B2 306 aaKnown RBP16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 TBC1D23Q9NUY8 699 aa16.9■□□□□ 0.3
NPC1L1-203ENST00000423141 RUVBL2Q9Y230 463 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms