RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 PGBD3Q8N328 593 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 NKAPQ8N5F7 415 aaKnown RBP9.4□□□□□ -0.9
CD109-202ENST00000422508 SH3RF3Q8TEJ3 882 aaPredicted RBP9.4□□□□□ -0.9
CD109-202ENST00000422508 RNF145Q96MT1 663 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 MGME1Q9BQP7 344 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 RUSC1Q9BVN2 902 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 TDRD1Q9BXT4 1180 aaKnown RBP9.4□□□□□ -0.9
CD109-202ENST00000422508 NOL11Q9H8H0 719 aaKnown RBP9.4□□□□□ -0.9
CD109-202ENST00000422508 S100A3P33764 101 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 FXR1P51114 621 aaKnown RBP eCLIP9.4□□□□□ -0.9
CD109-202ENST00000422508 SUZ12Q15022 739 aaKnown RBP9.4□□□□□ -0.9
CD109-202ENST00000422508 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.4□□□□□ -0.9
CD109-202ENST00000422508 NEDD1Q8NHV4 660 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 DCP1AQ9NPI6 582 aaPredicted RBP9.4□□□□□ -0.9
CD109-202ENST00000422508 TRPV5Q9NQA5 729 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 DPP3Q9NY33 737 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 HCN3Q9P1Z3 774 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 MAGEL2Q9UJ55 1249 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 DHRS7Q9Y394 339 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 ZNF185O15231 689 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 SERPINA3P01011 423 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 COX7A2P14406 83 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 LAYNQ6UX15 382 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 REXO5Q96IC2 774 aaKnown RBP9.4□□□□□ -0.9
CD109-202ENST00000422508 VPS45Q9NRW7 570 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 XPR1Q9UBH6 696 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 OPTCQ9UBM4 332 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 PCDHGA10Q9Y5H3 936 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 MATN2O00339 956 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 RGS10O43665 173 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 ZBTB14O43829 449 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 CCR1P32246 355 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 HALP42357 657 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 RPL14P50914 215 aaKnown RBP9.4□□□□□ -0.9
CD109-202ENST00000422508 EPHB3P54753 998 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 FGD3Q5JSP0 725 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 LRRC69Q6ZNQ3 347 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 SLC4A11Q8NBS3 891 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 DNAJA4Q8WW22 397 aaPredicted RBP9.4□□□□□ -0.9
CD109-202ENST00000422508 RHBDF1Q96CC6 855 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 IL1RAPQ9NPH3 570 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 CYLDQ9NQC7 956 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 CARD8Q9Y2G2 431 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 KIF13BQ9NQT8 1826 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 RAD17O75943 681 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 EPHB2P29323 1055 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 PSEN1P49768 467 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 PAMR1Q6UXH9 720 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 GPSM1Q86YR5 675 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 KLHL32Q96NJ5 620 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 KLF6Q99612 283 aaPredicted RBP9.4□□□□□ -0.9
CD109-202ENST00000422508 TTLL2Q9BWV7 592 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 NFKBIZQ9BYH8 718 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 AASSQ9UDR5 926 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 ZNF180Q9UJW8 692 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 FAM50BQ9Y247 325 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 TAF6LQ9Y6J9 622 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 LMTK2Q8IWU2 1503 aa9.4□□□□□ -0.9
CD109-202ENST00000422508 NUAK1O60285 661 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 STK4Q13043 487 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 LRRC34Q8IZ02 419 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 MKL1Q969V6 931 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 HOPXQ9BPY8 73 aaPredicted RBP9.4□□□□□ -0.91
CD109-202ENST00000422508 SLC28A1O00337 649 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 SLC9A3R1O14745 358 aaPredicted RBP9.4□□□□□ -0.91
CD109-202ENST00000422508 KCNQ3O43525 872 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 ASMTP46597 345 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 KLHL26Q53HC5 615 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 RIPOR1Q6ZS17 1223 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 C11orf96Q7Z7L8 435 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 DHDDSQ86SQ9 333 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 CD248Q9HCU0 757 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 SETD4Q9NVD3 440 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 TAS2R7Q9NYW3 318 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 GNEQ9Y223 722 aaKnown RBP9.4□□□□□ -0.91
CD109-202ENST00000422508 DNAJC16Q9Y2G8 782 aa9.4□□□□□ -0.91
CD109-202ENST00000422508 PDCD5O14737 125 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 CAMTA2O94983 1202 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 HLA-DRAP01903 254 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 RB1P06400 928 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 STAG3L4Q8TBR4 150 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 CASKIN2Q8WXE0 1202 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 SMARCD1Q96GM5 515 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 UBR1Q8IWV7 1749 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 WRBO00258 174 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 PAEPP09466 180 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 C1orf189Q5VU69 101 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 CHST15Q7LFX5 561 aaPredicted RBP9.39□□□□□ -0.91
CD109-202ENST00000422508 NT5DC3Q86UY8 548 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 CDC42EP4Q9H3Q1 356 aaKnown RBP9.39□□□□□ -0.91
CD109-202ENST00000422508 AXLP30530 894 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 ZNF662Q6ZS27 426 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 BNIPLQ7Z465 357 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 MRPS31Q92665 395 aaKnown RBP9.39□□□□□ -0.91
CD109-202ENST00000422508 SERPINB11Q96P15 392 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 PEX16Q9Y5Y5 336 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 ZSCAN5CA6NGD5 496 aaPredicted RBP9.39□□□□□ -0.91
CD109-202ENST00000422508 PSMG1O95456 288 aa9.39□□□□□ -0.91
CD109-202ENST00000422508 KCTD21Q4G0X4 260 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms