RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 GRIK2Q13002 908 aa22.38■■□□□ 1.17
TRAF4-204ENST00000422344 TEAD4Q15561 434 aa22.38■■□□□ 1.17
TRAF4-204ENST00000422344 C22orf39Q6P5X5 142 aa22.38■■□□□ 1.17
TRAF4-204ENST00000422344 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.38■■□□□ 1.17
TRAF4-204ENST00000422344 NLRP14Q86W24 1093 aa22.38■■□□□ 1.17
TRAF4-204ENST00000422344 DNAAF5Q86Y56 855 aa22.38■■□□□ 1.17
TRAF4-204ENST00000422344 PYROXD2Q8N2H3 581 aa22.38■■□□□ 1.17
TRAF4-204ENST00000422344 PIP4K2CQ8TBX8 421 aa22.38■■□□□ 1.17
TRAF4-204ENST00000422344 XPO4Q9C0E2 1151 aaKnown RBP22.38■■□□□ 1.17
TRAF4-204ENST00000422344 MRPL47Q9HD33 250 aaKnown RBP22.38■■□□□ 1.17
TRAF4-204ENST00000422344 MYO1AQ9UBC5 1043 aa22.38■■□□□ 1.17
TRAF4-204ENST00000422344 PPM1HQ9ULR3 514 aa22.38■■□□□ 1.17
TRAF4-204ENST00000422344 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.38■■□□□ 1.175e-8■■■■□ 23.6
TRAF4-204ENST00000422344 UPK3BL1B0FP48 263 aa22.37■■□□□ 1.17
TRAF4-204ENST00000422344 UPK3BL2E5RIL1 263 aa22.37■■□□□ 1.17
TRAF4-204ENST00000422344 SMAD6O43541 496 aaKnown RBP22.37■■□□□ 1.17
TRAF4-204ENST00000422344 SERPINH1P50454 418 aaKnown RBP22.37■■□□□ 1.17
TRAF4-204ENST00000422344 GEMIN4P57678 1058 aaKnown RBP22.37■■□□□ 1.17
TRAF4-204ENST00000422344 POM121L1PQ3SYA9 428 aa22.37■■□□□ 1.17
TRAF4-204ENST00000422344 ZNF354CQ86Y25 554 aa22.37■■□□□ 1.17
TRAF4-204ENST00000422344 CEP44Q9C0F1 390 aa22.37■■□□□ 1.17
TRAF4-204ENST00000422344 MAGEH1Q9H213 219 aa22.37■■□□□ 1.17
TRAF4-204ENST00000422344 CATSPERBQ9H7T0 1116 aa22.37■■□□□ 1.17
TRAF4-204ENST00000422344 DYRK4Q9NR20 520 aa22.37■■□□□ 1.17
TRAF4-204ENST00000422344 MSRB2Q9Y3D2 182 aa22.37■■□□□ 1.17
TRAF4-204ENST00000422344 PCDH15Q96QU1 1955 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 TMEM191CA6NGB0 347 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 SLC7A4O43246 635 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 ZMPSTE24O75844 475 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 PRNPP04156 253 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 HOXB3P14651 431 aaPredicted RBP22.36■■□□□ 1.17
TRAF4-204ENST00000422344 CHRNA3P32297 505 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 ACVRL1P37023 503 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 DNA2P51530 1060 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 ADPRHP54922 357 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 POLD3Q15054 466 aaPredicted RBP22.36■■□□□ 1.17
TRAF4-204ENST00000422344 NFKBIBQ15653 356 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 HGSNATQ68CP4 663 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 RTL3Q8N8U3 475 aaKnown RBP22.36■■□□□ 1.17
TRAF4-204ENST00000422344 OR2A12Q8NGT7 310 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 OR2I1PQ8NGU4 316 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 ARHGEF2Q92974 986 aaKnown RBP22.36■■□□□ 1.17
TRAF4-204ENST00000422344 ACE2Q9BYF1 805 aaPredicted RBP22.36■■□□□ 1.17
TRAF4-204ENST00000422344 ISCUQ9H1K1 167 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 TNKS2Q9H2K2 1166 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 NDFIP2Q9NV92 336 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 SARDHQ9UL12 918 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 TPX2Q9ULW0 747 aaKnown RBP22.36■■□□□ 1.17
TRAF4-204ENST00000422344 NEU3Q9UQ49 428 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 NUMA1Q14980 2115 aa22.36■■□□□ 1.17
TRAF4-204ENST00000422344 TBC1D3DA0A087WVF3 549 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 TBC1D3IA0A087WXS9 549 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 TBC1D3EA0A087X179 549 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 TBC1D3KA0A087X1G2 549 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 TBC1D3FA6NER0 549 aaPredicted RBP22.35■■□□□ 1.17
TRAF4-204ENST00000422344 TBC1D3LB9A6J9 549 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 PLK4O00444 970 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 KPNA3O00505 521 aaPredicted RBP22.35■■□□□ 1.17
TRAF4-204ENST00000422344 GYPCP04921 128 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 IGHV4-34P06331 123 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 TBC1D3HP0C7X1 549 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 DRD3P35462 400 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 METAP1P53582 386 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 FAM193AP78312 1265 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 ARF5P84085 180 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 CCDC15Q0P6D6 951 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 COL9A2Q14055 689 aaPredicted RBP22.35■■□□□ 1.17
TRAF4-204ENST00000422344 TBC1D3GQ6DHY5 549 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 TBC1D3CQ6IPX1 549 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 IL27RAQ6UWB1 636 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 ADAT2Q7Z6V5 191 aaKnown RBP22.35■■□□□ 1.17
TRAF4-204ENST00000422344 TBC1D3Q8IZP1 549 aaPredicted RBP22.35■■□□□ 1.17
TRAF4-204ENST00000422344 PCDH20Q8N6Y1 951 aaKnown RBP22.35■■□□□ 1.17
TRAF4-204ENST00000422344 C1orf216Q8TAB5 229 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 FNIP1Q8TF40 1166 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 TM9SF3Q9HD45 589 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 OSGEPQ9NPF4 335 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 AP4E1Q9UPM8 1137 aa22.35■■□□□ 1.17
TRAF4-204ENST00000422344 ANKRD11Q6UB99 2663 aaPredicted RBP22.34■■□□□ 1.17
TRAF4-204ENST00000422344 CXorf51AA0A1B0GTR3 108 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 A0A1B0GVT2 93 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 FGF10O15520 208 aaPredicted RBP22.34■■□□□ 1.17
TRAF4-204ENST00000422344 PRPSAP2O60256 369 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 CER1O95813 267 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 CASP14P31944 242 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 HTR7P34969 479 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 CSNK1EP49674 416 aaKnown RBP22.34■■□□□ 1.17
TRAF4-204ENST00000422344 CCR5P51681 352 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 TPI1P60174 286 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 CNTN1Q12860 1018 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 TMIEQ8NEW7 156 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 GRIN3AQ8TCU5 1115 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 NCAPGQ9BPX3 1015 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 KDM4CQ9H3R0 1056 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 DHX35Q9H5Z1 703 aaKnown RBP22.34■■□□□ 1.17
TRAF4-204ENST00000422344 DNAAF2Q9NVR5 837 aaKnown RBP22.34■■□□□ 1.17
TRAF4-204ENST00000422344 DONSONQ9NYP3 566 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 IL36AQ9UHA7 158 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 PCSK1NQ9UHG2 260 aa22.34■■□□□ 1.17
TRAF4-204ENST00000422344 FCF1Q9Y324 198 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms