RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 NOC3LQ8WTT2 800 aaKnown RBP6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 TMEM174Q8WUU8 243 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 KBTBD7Q8WVZ9 684 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 RBM15Q96T37 977 aaKnown RBP eCLIP6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 TRIM54Q9BYV2 358 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 HSD3B7Q9H2F3 369 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 THAP9Q9H5L6 903 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 PTPRHQ9HD43 1115 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 AGPAT3Q9NRZ7 376 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 DMAC2Q9NW81 257 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 CPNE7Q9UBL6 633 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 MED16Q9Y2X0 877 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 NFE2L3Q9Y4A8 694 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 SNX13Q9Y5W8 968 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 COMMD10Q9Y6G5 202 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 STYXL1Q9Y6J8 313 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 TRIP12Q14669 1992 aaPredicted RBP6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 HTTP42858 3142 aa6.29□□□□□ -1.4
NIFKP3-201ENST00000417799 CNTNAP2Q9UHC6 1331 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 A0A1B0GUA9 196 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ZNF785A8K8V0 405 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 CETN3O15182 167 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 CLDN3O15551 220 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 B4GALT5O43286 388 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 TSPAN1O60635 241 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ZNF623O75123 536 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 RPS6KA5O75582 802 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ITGB3P05106 788 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ZNF18P17022 549 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 FGFR4P22455 802 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 PROZP22891 400 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ADSSP30520 456 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 AXLP30530 894 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 HOXA11P31270 313 aaPredicted RBP6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 CYP2J2P51589 502 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 CHN2P52757 468 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ARFIP2P53365 341 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 TPM4P67936 248 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 NCBP1Q09161 790 aaKnown RBP6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 HABP2Q14520 560 aaPredicted RBP6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 LRRC26Q2I0M4 334 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 FBXO47Q5MNV8 452 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ATF7IP2Q5U623 682 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ARMCX5Q6P1M9 558 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 SPOCD1Q6ZMY3 1216 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 Q6ZSN1 163 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 SRLQ86TD4 932 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 FAM114A1Q8IWE2 563 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 FAM186BQ8IYM0 893 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ZNF808Q8N4W9 903 aaPredicted RBP6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 OR6B3Q8NGW1 331 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 POMGNT1Q8WZA1 660 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 EEF2KMTQ96G04 330 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ZBTB45Q96K62 511 aaPredicted RBP6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 CBWD1Q9BRT8 395 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 TCHPQ9BT92 498 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 NLRC4Q9NPP4 1024 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 SAMSN1Q9NSI8 373 aaKnown RBP6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ST3GAL5Q9UNP4 418 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 CORO2BQ9UQ03 480 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 TNFSF13BQ9Y275 285 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 ATP11BQ9Y2G3 1177 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 SQORQ9Y6N5 450 aa6.28□□□□□ -1.4
NIFKP3-201ENST00000417799 A0A0B4J269 797 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 KCNJ18B7U540 433 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 FOXN3O00409 490 aaPredicted RBP6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 MAPK13O15264 365 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 SLC16A3O15427 465 aaKnown RBP6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 EXOC3O60645 756 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 AKAP3O75969 853 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 GNA14O95837 355 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 LDHAP00338 332 aaKnown RBP6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 CLTBP09497 229 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 MCF2P10911 925 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 ATP1A3P13637 1013 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 ARF4P18085 180 aaPredicted RBP6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 ACO1P21399 889 aaKnown RBP6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 EEF1GP26641 437 aaKnown RBP6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 PSMC2P35998 433 aaKnown RBP6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 MATR3P43243 847 aaKnown RBP eCLIP6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 HTR3AP46098 478 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 PRIM2P49643 509 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 CASP4P49662 377 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 RABGGTBP53611 331 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 SPAG1Q07617 926 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 KCNJ12Q14500 433 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 LPIN1Q14693 890 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 HSP90AA4PQ58FG1 418 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 TCP11X2Q5H9J9 407 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 C1QL3Q5VWW1 255 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 NOTUMQ6P988 496 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 ZNF783Q6ZMS7 281 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 LRRC8DQ7L1W4 858 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 FAM228AQ86W67 206 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 CDR2LQ86X02 465 aaPredicted RBP6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 CREBRFQ8IUR6 639 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 SYT12Q8IV01 421 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 GPD1LQ8N335 351 aa6.27□□□□□ -1.41
NIFKP3-201ENST00000417799 USP38Q8NB14 1042 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms