RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 DRAP1Q14919 205 aaPredicted RBP15.15■□□□□ 0.02
RPS28-201ENST00000417088 TPD52L1Q16890 204 aaPredicted RBP15.15■□□□□ 0.02
RPS28-201ENST00000417088 VWA3BQ502W6 1294 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 ARSIQ5FYB1 569 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 FAM102AQ5T9C2 384 aaPredicted RBP15.15■□□□□ 0.02
RPS28-201ENST00000417088 TRNP1Q6NT89 227 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 C22orf39Q6P5X5 142 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 DPY19L3Q6ZPD9 716 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 ERN2Q76MJ5 926 aaKnown RBP15.15■□□□□ 0.02
RPS28-201ENST00000417088 ERICH1Q86X53 443 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 OR13H1Q8NG92 308 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 HDAC8Q9BY41 377 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 CAAP1Q9H8G2 361 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 FZD3Q9NPG1 666 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 DYRK4Q9NR20 520 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 UCKL1Q9NWZ5 548 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 ZNF212Q9UDV6 495 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 IL36AQ9UHA7 158 aa15.15■□□□□ 0.02
RPS28-201ENST00000417088 MYLKQ15746 1914 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 ILVBLA1L0T0 632 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 ZNF821O75541 412 aaPredicted RBP15.14■□□□□ 0.01
RPS28-201ENST00000417088 ZMPSTE24O75844 475 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 ENDOD1O94919 500 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 PCDH8O95206 1070 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 GIMD1P0DJR0 217 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 HNRNPA2B1P22626 353 aaKnown RBP15.14■□□□□ 0.01
RPS28-201ENST00000417088 CLDN2P57739 230 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 C2CD6Q53TS8 623 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 ACBD5Q5T8D3 534 aaPredicted RBP15.14■□□□□ 0.01
RPS28-201ENST00000417088 SEL1L3Q68CR1 1132 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 GCNT7Q6ZNI0 430 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 BNIPLQ7Z465 357 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 FAM114A1Q8IWE2 563 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 DCBLD1Q8N8Z6 715 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 OR4C6Q8NH72 309 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 GRIN3AQ8TCU5 1115 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 HAPLN3Q96S86 360 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 TUBGCP2Q9BSJ2 902 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 SPON2Q9BUD6 331 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 TMEM51Q9NW97 253 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 TMEM59LQ9UK28 342 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 FHOD1Q9Y613 1164 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 WASF2Q9Y6W5 498 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 PTPRQQ9UMZ3 2332 aa15.14■□□□□ 0.01
RPS28-201ENST00000417088 GOLGA8SH3BPF8 625 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 SRGAP2O75044 1071 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 LEFTY1O75610 366 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 PIAS2O75928 621 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 PRKCSHP14314 528 aaPredicted RBP15.13■□□□□ 0.01
RPS28-201ENST00000417088 RECQLP46063 649 aaPredicted RBP15.13■□□□□ 0.01
RPS28-201ENST00000417088 DAB2P98082 770 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 E2F1Q01094 437 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 TMEM259Q4ZIN3 620 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 HSP90AA4PQ58FG1 418 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 KLHDC7AQ5VTJ3 777 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 TAF3Q5VWG9 929 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 RETSATQ6NUM9 610 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 ZNF783Q6ZMS7 281 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 ABI3BPQ7Z7G0 1075 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 CFAP57Q96MR6 1250 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 NAA15Q9BXJ9 866 aaKnown RBP15.13■□□□□ 0.01
RPS28-201ENST00000417088 CALN1Q9BXU9 219 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 CEP44Q9C0F1 390 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 CLCA2Q9UQC9 943 aa15.13■□□□□ 0.01
RPS28-201ENST00000417088 FFAR2O15552 330 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 LSM8O95777 96 aaKnown RBP15.12■□□□□ 0.01
RPS28-201ENST00000417088 MT-CO3P00414 261 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 SERPINH1P50454 418 aaKnown RBP15.12■□□□□ 0.01
RPS28-201ENST00000417088 NEK3P51956 506 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 ARF5P84085 180 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 SLC20A2Q08357 652 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 FGL2Q14314 439 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 DPCR1Q3MIW9 517 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 Q6ZSR6 202 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 NOP9Q86U38 636 aaKnown RBP15.12■□□□□ 0.01
RPS28-201ENST00000417088 FAM131BQ86XD5 332 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 SLC22A18ASQ8N1D0 253 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 SNIP1Q8TAD8 396 aaKnown RBP15.12■□□□□ 0.01
RPS28-201ENST00000417088 CPA5Q8WXQ8 436 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 PPP1R16AQ96I34 528 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 BMFQ96LC9 184 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 ZYG11BQ9C0D3 744 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 ATP13A1Q9HD20 1204 aa15.12■□□□□ 0.01
RPS28-201ENST00000417088 TDRD6O60522 2096 aaKnown RBP15.12■□□□□ 0.01
RPS28-201ENST00000417088 BPTFQ12830 3046 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 A6NNZ2 444 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 BRINP1O60477 761 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 MMEP08473 750 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 CKMT1AP12532 417 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 ADRB3P13945 408 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 UCHL3P15374 230 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 ERCC5P28715 1186 aaPredicted RBP15.11■□□□□ 0.01
RPS28-201ENST00000417088 L1CAMP32004 1257 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 DNA2P51530 1060 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 NOMO3P69849 1222 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 GNA12Q03113 381 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 MAPK8IP2Q13387 824 aaPredicted RBP15.11■□□□□ 0.01
RPS28-201ENST00000417088 HS1BP3Q53T59 392 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 ZNF542PQ5EBM4 170 aa15.11■□□□□ 0.01
RPS28-201ENST00000417088 CARD16Q5EG05 197 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms