RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 PREPLQ4J6C6 727 aaPredicted RBP13.35□□□□□ -0.27
CNOT4-204ENST00000414802 RETSATQ6NUM9 610 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 C22orf39Q6P5X5 142 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 ZNF852Q6ZMS4 543 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 LRRC49Q8IUZ0 686 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 CCDC105Q8IYK2 499 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 SH2D3CQ8N5H7 860 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 NSMCE1Q8WV22 266 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 UCMAQ8WVF2 138 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 MAML1Q92585 1016 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 MYO19Q96H55 970 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 TUBB2BQ9BVA1 445 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 CINPQ9BW66 212 aaPredicted RBP13.35□□□□□ -0.27
CNOT4-204ENST00000414802 TM6SF2Q9BZW4 377 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 BRD8Q9H0E9 1235 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 TNKS2Q9H2K2 1166 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 TBC1D17Q9HA65 648 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 USP29Q9HBJ7 922 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 HOMER3Q9NSC5 361 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 CACNA2D2Q9NY47 1150 aa13.35□□□□□ -0.27
CNOT4-204ENST00000414802 MTF2Q9Y483 593 aaPredicted RBP13.35□□□□□ -0.27
CNOT4-204ENST00000414802 TTC24A2A3L6 582 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 WASH3PC4AMC7 463 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 MAN2B1O00754 1011 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 MUSKO15146 869 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 BNIP3LO60238 219 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 RNF40O75150 1001 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 GJB3O75712 270 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 ITGAVP06756 1048 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 CHRM1P11229 460 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 DRD1P21728 446 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 CHRNA3P32297 505 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 IL12RB1P42701 662 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 MMP13P45452 471 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 RGRP47804 291 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 FNTAP49354 379 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 MAXP61244 160 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 IFI35P80217 286 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 TRIP13Q15645 432 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 ACCSLQ4AC99 568 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 C2orf27AQ580R0 203 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 ATXN7L2Q5T6C5 722 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 DRICH1Q6PGQ1 229 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 GSTA5Q7RTV2 222 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 PGBD5Q8N414 524 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 TAB3Q8N5C8 712 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 ALLCQ8N6M5 410 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 ZNF513Q8N8E2 541 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 TSEN2Q8NCE0 465 aaKnown RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 CCDC110Q8TBZ0 833 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 AGAP3Q96P47 875 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 L2HGDHQ9H9P8 463 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 LTB4R2Q9NPC1 389 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 RBM22Q9NW64 420 aaKnown RBP eCLIP13.34□□□□□ -0.271e-7■■■■■ 31.6
CNOT4-204ENST00000414802 LHX3Q9UBR4 397 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 HS3ST2Q9Y278 367 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 CACNA1IQ9P0X4 2223 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 NUMA1Q14980 2115 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 A0A0A0MRY4 1105 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 CTAGE15A4D2H0 777 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 CFAP69A5D8W1 941 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 CCDC188H7C350 402 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 NEBLO76041 1014 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 SRPRAP08240 638 aaKnown RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 ZSCAN5DPP0CG00 497 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 CTAGE8P0CG41 777 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 PRKCHP24723 683 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 TNFRSF4P43489 277 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 KIR2DL1P43626 348 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 RHOAP61586 193 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 ST8SIA6P61647 398 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 ZNF33AQ06730 810 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 CCINQ13939 588 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 DLG2Q15700 870 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 MARC1Q5VT66 337 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 Q6ZS52 159 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 NUDT18Q6ZVK8 323 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 Q6ZVU0 165 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 CTAGE6Q86UF2 777 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 CTAGE4Q8IX94 777 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 ZNF567Q8N184 647 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 NOA1Q8NC60 698 aaKnown RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 OR6K2Q8NGY2 324 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 ZNF599Q96NL3 588 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 IL12RB2Q99665 862 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 KLHL8Q9P2G9 620 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 THAP10Q9P2Z0 257 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-204ENST00000414802 AMACRQ9UHK6 382 aa13.34□□□□□ -0.27
CNOT4-204ENST00000414802 LRRK1Q38SD2 2015 aa13.33□□□□□ -0.27
CNOT4-204ENST00000414802 KANSL1LA0AUZ9 987 aa13.33□□□□□ -0.28
CNOT4-204ENST00000414802 ZNF821O75541 412 aaPredicted RBP13.33□□□□□ -0.28
CNOT4-204ENST00000414802 PDGFBP01127 241 aaPredicted RBP13.33□□□□□ -0.28
CNOT4-204ENST00000414802 VPS41P49754 854 aa13.33□□□□□ -0.28
CNOT4-204ENST00000414802 GEMIN4P57678 1058 aaKnown RBP13.33□□□□□ -0.28
CNOT4-204ENST00000414802 STARD6P59095 220 aa13.33□□□□□ -0.28
CNOT4-204ENST00000414802 HNRNPDQ14103 355 aaKnown RBP13.33□□□□□ -0.28
CNOT4-204ENST00000414802 DGKKQ5KSL6 1271 aa13.33□□□□□ -0.28
CNOT4-204ENST00000414802 PKN3Q6P5Z2 889 aa13.33□□□□□ -0.28
CNOT4-204ENST00000414802 SERPINA13PQ6UXR4 307 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms