RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SLC4A11Q8NBS3 891 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 SLC17A8Q8NDX2 589 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 LENG8Q96PV6 779 aaPredicted RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 NR1H4Q96RI1 486 aaPredicted RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 OSBPL10Q9BXB5 764 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 SMARCAD1Q9H4L7 1026 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 DHX33Q9H6R0 707 aaKnown RBP9.58□□□□□ -0.88
SNHG3-201ENST00000413987 TLE6Q9H808 572 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 ERAP1Q9NZ08 941 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 KCND2Q9NZV8 630 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 SRRDQ9UH36 339 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 CLEC4AQ9UMR7 237 aa9.58□□□□□ -0.88
SNHG3-201ENST00000413987 H3BML4 177 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 B3GALT2O43825 422 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 SYNCRIPO60506 623 aaKnown RBP9.57□□□□□ -0.88
SNHG3-201ENST00000413987 ITGB1P05556 798 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 CDH3P22223 829 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 GLRA2P23416 452 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 RPL21P46778 160 aaKnown RBP9.57□□□□□ -0.88
SNHG3-201ENST00000413987 CASP4P49662 377 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 CPT1AP50416 773 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 GALCP54803 685 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 ZNF200P98182 395 aaPredicted RBP9.57□□□□□ -0.88
SNHG3-201ENST00000413987 RNASELQ05823 741 aaKnown RBP9.57□□□□□ -0.88
SNHG3-201ENST00000413987 TMEM62Q0P6H9 643 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 CALCOCO2Q13137 446 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 EFR3AQ14156 821 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 RCN2Q14257 317 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 MAPKAPK3Q16644 382 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 EXOC3L4Q17RC7 722 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 TIGD6Q17RP2 521 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 KNOP1Q1ED39 458 aaKnown RBP9.57□□□□□ -0.88
SNHG3-201ENST00000413987 BBS9Q3SYG4 887 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 CTXN3Q4LDR2 81 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 NPNTQ6UXI9 565 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 B3GNT6Q6ZMB0 384 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 PLPPR4Q7Z2D5 763 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 HAUS6Q7Z4H7 955 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 CMIPQ8IY22 773 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 REM2Q8IYK8 340 aaPredicted RBP9.57□□□□□ -0.88
SNHG3-201ENST00000413987 TTC39CQ8N584 583 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 U2AF1L4Q8WU68 220 aaKnown RBP9.57□□□□□ -0.88
SNHG3-201ENST00000413987 NCSTNQ92542 709 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 ACAP3Q96P50 834 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 TXN2Q99757 166 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 TM9SF2Q99805 663 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 GCOM2Q9BZD3 368 aaPredicted RBP9.57□□□□□ -0.88
SNHG3-201ENST00000413987 PAIP1Q9H074 479 aaKnown RBP9.57□□□□□ -0.88
SNHG3-201ENST00000413987 MIS12Q9H081 205 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 PCIF1Q9H4Z3 704 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 SAR1AQ9NR31 198 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 SETD4Q9NVD3 440 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 MALT1Q9UDY8 824 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 LNPEPQ9UIQ6 1025 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 SRPK3Q9UPE1 567 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 PRELID1Q9Y255 219 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 NR2E1Q9Y466 385 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 EVPLQ92817 2033 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 LAMA3Q16787 3333 aa9.57□□□□□ -0.88
SNHG3-201ENST00000413987 DENND3A2RUS2 1198 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 SIGLEC16A6NMB1 481 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 NUDT19A8MXV4 375 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 TJP3O95049 919 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 ASGR1P07306 291 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 NR2F1P10589 423 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 PTPN2P17706 415 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 NR2F2P24468 414 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 CTNNA2P26232 953 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 PRKAR1BP31321 381 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 PPP5CP53041 499 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 DSG1Q02413 1049 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 DMP1Q13316 513 aaPredicted RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 LASP1Q14847 261 aaKnown RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 DGKDQ16760 1214 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 ZNF568Q3ZCX4 644 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 SV2CQ496J9 727 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 CGB2Q6NT52 195 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 DENND1CQ8IV53 801 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 ANKLE1Q8NAG6 615 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 ZSCAN1Q8NBB4 408 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 TMEM161BQ8NDZ6 487 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 RAET1EQ8TD07 263 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 PRPF31Q8WWY3 499 aaKnown RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 LRTOMTQ8WZ04 291 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 NDNQ99608 321 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 CCDC77Q9BR77 488 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 OXCT2Q9BYC2 517 aaPredicted RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 NRBP2Q9NSY0 501 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 HAO1Q9UJM8 370 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 CLCA2Q9UQC9 943 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 PCDHB14Q9Y5E9 798 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.56□□□□□ -0.88
SNHG3-201ENST00000413987 A0A0U1RQK1 487 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 ZNF320A2RRD8 509 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 PROM1O43490 865 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 MGEA5O60502 916 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 UBXN7O94888 489 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 OLFM2O95897 454 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 VTNP04004 478 aa9.56□□□□□ -0.88
SNHG3-201ENST00000413987 AKR1A1P14550 325 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms