RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 SYPL2Q5VXT5 272 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 KIAA1211LQ6NV74 962 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 TADA2BQ86TJ2 420 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 CCDC13Q8IYE1 715 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 TTC8Q8TAM2 541 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 PYROXD1Q8WU10 500 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 KCNK16Q96T55 309 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 VPS37BQ9H9H4 285 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 ETNK2Q9NVF9 386 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 TMEM51Q9NW97 253 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 SENP1Q9P0U3 644 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 NAALADL1Q9UQQ1 740 aa17.51■□□□□ 0.39
PTPRC-206ENST00000413409 TCRBV7S3A2A0A539 114 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 HEPACAM2A8MVW5 462 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 SPECC1L-ADORA2AF8WAN1 911 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 HYAL3O43820 417 aaPredicted RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 MFSD11O43934 449 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 SEC24AO95486 1093 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 LRG1P02750 347 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 CAPNS1P04632 268 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 USP17L7P0C7H9 530 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 CEACAM1P13688 526 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 AMPD1P23109 780 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 ADRA1BP35368 520 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 KPNA1P52294 538 aaPredicted RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 YWHAHQ04917 246 aaPredicted RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 ELAVL2Q12926 359 aaKnown RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 PRKD1Q15139 912 aaPredicted RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 C19orf48Q6RUI8 117 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 SPATS2Q86XZ4 545 aaKnown RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 ZSCAN18Q8TBC5 510 aaPredicted RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 MAML1Q92585 1016 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 WDR83Q9BRX9 315 aaKnown RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 DUSP15Q9H1R2 295 aaPredicted RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 ACSS3Q9H6R3 686 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 C8orf33Q9H7E9 229 aaPredicted RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 RAB6BQ9NRW1 208 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 TMLHEQ9NVH6 421 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 POLR3BQ9NW08 1133 aaPredicted RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 PRDM4Q9UKN5 801 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 KLK13Q9UKR3 277 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 BACE2Q9Y5Z0 518 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 ATXN2Q99700 1313 aaKnown RBP17.5■□□□□ 0.39
PTPRC-206ENST00000413409 EML5Q05BV3 1969 aa17.5■□□□□ 0.39
PTPRC-206ENST00000413409 LNP1A1A4G5 178 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 GMNCA6NCL1 334 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 GOLGA8MH3BSY2 632 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 EEF2KO00418 725 aaKnown RBP17.49■□□□□ 0.39
PTPRC-206ENST00000413409 ZNF197O14709 1029 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 DCLK1O15075 740 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 ABLIM3O94929 683 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 NCAM1P13591 858 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 BDNFP23560 247 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 GCAP28676 217 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 CTHP32929 405 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 CXCR3P49682 368 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 GPX6P59796 221 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 GAD2Q05329 585 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 SLC10A2Q12908 348 aaPredicted RBP17.49■□□□□ 0.39
PTPRC-206ENST00000413409 NME3Q13232 169 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 PDK1Q15118 436 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 PON2Q15165 354 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 ARL13BQ3SXY8 428 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 BBS9Q3SYG4 887 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 MSS51Q4VC12 460 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 PDZD4Q76G19 769 aaPredicted RBP17.49■□□□□ 0.39
PTPRC-206ENST00000413409 PYROXD2Q8N2H3 581 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 FBXO36Q8NEA4 188 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 CSGALNACT1Q8TDX6 532 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 ZNF473Q8WTR7 871 aaKnown RBP17.49■□□□□ 0.39
PTPRC-206ENST00000413409 TFB1MQ8WVM0 346 aaKnown RBP17.49■□□□□ 0.39
PTPRC-206ENST00000413409 LRRC39Q96DD0 335 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 MSANTD3Q96H12 275 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 FERMT1Q9BQL6 677 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 ZCWPW1Q9H0M4 648 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 INTS9Q9NV88 658 aaKnown RBP17.49■□□□□ 0.39
PTPRC-206ENST00000413409 PSMC3IPQ9P2W1 217 aaPredicted RBP17.49■□□□□ 0.39
PTPRC-206ENST00000413409 CTNNAL1Q9UBT7 734 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 GPSM3Q9Y4H4 160 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 NEUROG3Q9Y4Z2 214 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 CACNA1EQ15878 2313 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 CELSR3Q9NYQ7 3312 aa17.49■□□□□ 0.39
PTPRC-206ENST00000413409 A0A0A0MRY4 1105 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 CCDC163A0A0D9SF12 145 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 PPP1R12AO14974 1030 aaPredicted RBP17.48■□□□□ 0.39
PTPRC-206ENST00000413409 SYN3O14994 580 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 STK10O94804 968 aaKnown RBP17.48■□□□□ 0.39
PTPRC-206ENST00000413409 OAZ2O95190 189 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 IGLV3-25P01717 112 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 GSTA2P09210 222 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 CSRP1P21291 193 aaKnown RBP17.48■□□□□ 0.39
PTPRC-206ENST00000413409 FDFT1P37268 417 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 SEMA5AQ13591 1074 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 TMED2Q15363 201 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 VSTM1Q6UX27 236 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 RFX8Q6ZV50 586 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 B4GALNT4Q76KP1 1039 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 PDZD3Q86UT5 571 aa17.48■□□□□ 0.39
PTPRC-206ENST00000413409 SPATA2LQ8IUW3 424 aaPredicted RBP17.48■□□□□ 0.39
PTPRC-206ENST00000413409 ANKMY2Q8IV38 441 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms