RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CPNE5Q9HCH3 593 aa2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 FSCN3Q9NQT6 498 aa2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SEMA4GQ9NTN9 838 aa2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SH3BP4Q9P0V3 963 aa2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 STK26Q9P289 416 aa2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 DKK3Q9UBP4 350 aa2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 RAB21Q9UL25 225 aa2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 VPS4AQ9UN37 437 aa2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 ARHGAP26Q9UNA1 814 aa2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 SCAF8Q9UPN6 1271 aaKnown RBP2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 AFG3L2Q9Y4W6 797 aa2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 PCDHB2Q9Y5E7 798 aa2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 HEMK1Q9Y5R4 338 aaPredicted RBP2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 COPG1Q9Y678 874 aaKnown RBP2.84□□□□□ -1.95
RNU6-1140P-201ENST00000410517 CGNL1Q0VF96 1302 aa2.84□□□□□ -1.96
RNU6-1140P-201ENST00000410517 WDR17Q8IZU2 1322 aa2.84□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CACNA1IQ9P0X4 2223 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 VWA3AA6NCI4 1184 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 GAGE10A6NGK3 116 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SERINC4A6NH21 518 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CLIC1O00299 241 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 PEX12O00623 359 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 DSCR3O14972 297 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SYN3O14994 580 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CA12O43570 354 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 C1QL1O75973 258 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 MBD4O95243 580 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 HSPA1AP0DMV8 641 aaKnown RBP2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 HSPA1BP0DMV9 641 aaKnown RBP2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CPA1P15085 419 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 HOXB9P17482 250 aaPredicted RBP2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 IGFBP2P18065 325 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 PSMA4P25789 261 aaKnown RBP2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CNTFP26441 200 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CERS1P27544 350 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 NDUFS1P28331 727 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CHRNA5P30532 468 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 HOXD12P35452 270 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 GPC5P78333 572 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 RPP30P78346 268 aaKnown RBP2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 RAE1P78406 368 aaKnown RBP2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 GOLGA8DPQ0D2H9 430 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 PDCLQ13371 301 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 DCTN1Q14203 1278 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 BAK1Q16611 211 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CBWD5Q5RIA9 395 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 GRHL2Q6ISB3 625 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CYB5R4Q7L1T6 521 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 HERC6Q8IVU3 1022 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 LINC01465Q8N7H1 131 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 PCYOX1LQ8NBM8 494 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 BCAS4Q8TDM0 211 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 HTRA1Q92743 480 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SAAL1Q96ER3 474 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ZFYVE19Q96K21 471 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 FCRL4Q96PJ5 515 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 LENG8Q96PV6 779 aaPredicted RBP2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 REEP2Q9BRK0 252 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 THAP7Q9BT49 309 aaPredicted RBP2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 WACQ9BTA9 647 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 NPLQ9BXD5 320 aaPredicted RBP2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CADM1Q9BY67 442 aaKnown RBP2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 TRIM31Q9BZY9 425 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SAP30LQ9HAJ7 183 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 AS3MTQ9HBK9 375 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ENTPD7Q9NQZ7 604 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 VPS45Q9NRW7 570 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 HCN3Q9P1Z3 774 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 FBXO40Q9UH90 709 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 C10orf71Q711Q0 1435 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ATP10DQ9P241 1426 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ABCC6O95255 1503 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 TULP4Q9NRJ4 1543 aa2.83□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CLTCL1P53675 1640 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 E9PCH4 1651 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CFAP65Q6ZU64 1925 aaKnown RBP2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 A6NLC8 198 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 TARM1B6A8C7 271 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 MCIDASD6RGH6 385 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 F5H0A9 414 aaPredicted RBP2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 GRM8O00222 908 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 FYB1O15117 783 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 INPPL1O15357 1258 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 TMEM63AO94886 807 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 AGR2O95994 175 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 IRF1P10914 325 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ALADP13716 330 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 PCSK6P29122 969 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ARL3P36405 182 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 GEMIN4P57678 1058 aaKnown RBP2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 YWHAZP63104 245 aaKnown RBP2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 TUBA4AP68366 448 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SIM1P81133 766 aaPredicted RBP2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SP2Q02086 613 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CDK18Q07002 472 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 LMOD3Q0VAK6 560 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CAMK1Q14012 370 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 GALNT3Q14435 633 aa2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SRSF7Q16629 238 aaKnown RBP eCLIP2.82□□□□□ -1.96
RNU6-1140P-201ENST00000410517 NFIL3Q16649 462 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms