RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 VAV3Q9UKW4 847 aa10.8□□□□□ -0.68
NIF3L1-204ENST00000409357 PRELID1Q9Y255 219 aa10.8□□□□□ -0.68
NIF3L1-204ENST00000409357 CORINQ9Y5Q5 1042 aa10.8□□□□□ -0.68
NIF3L1-204ENST00000409357 UNC80Q8N2C7 3258 aa10.8□□□□□ -0.68
NIF3L1-204ENST00000409357 PRUNE2Q8WUY3 3088 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 A0A1B0GTW7 788 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 LOC105371267A0A1B0GV96 52 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TCRBV3S1A0A5B6 114 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ISPDA4D126 451 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 SOX1O00570 391 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 KLHL41O60662 606 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 PQBP1O60828 265 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 H2AFYO75367 372 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 SLC34A2O95436 690 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ASGR1P07306 291 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CYP3A4P08684 503 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ETS1P14921 441 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 XRCC1P18887 633 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ITGB8P26012 769 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CST5P28325 142 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CA8P35219 290 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ELK3P41970 407 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 NSFP46459 744 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 LEPRP48357 1165 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TLE2Q04725 743 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 SELPLGQ14242 412 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 SF3B4Q15427 424 aaKnown RBP eCLIP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 BBS9Q3SYG4 887 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TIGD2Q4W5G0 525 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 FASTKD1Q53R41 847 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ZNF618Q5T7W0 954 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ANKRD22Q5VYY1 191 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 FAAH2Q6GMR7 532 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 MFSD7Q6UXD7 560 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 BBS12Q6ZW61 710 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TFAP2DQ7Z6R9 452 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TLK2Q86UE8 772 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 UNC5BQ8IZJ1 945 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 XXYLT1Q8NBI6 393 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 BHLHE22Q8NFJ8 381 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 HPS1Q92902 700 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 LENG9Q96B70 501 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TRIM43Q96BQ3 446 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CLIP3Q96DZ5 547 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 SH3YL1Q96HL8 342 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 BTN2A3PQ96KV6 586 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TAAR1Q96RJ0 339 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CDRT15Q96T59 188 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 SORT1Q99523 831 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 SENP7Q9BQF6 1050 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 KLHL25Q9H0H3 589 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ZNF385DQ9H6B1 395 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TMEM8AQ9HCN3 771 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 PRDM5Q9NQX1 630 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 PDLIM7Q9NR12 457 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TCAF1Q9Y4C2 921 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TRAF6Q9Y4K3 522 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ANGPTL3Q9Y5C1 460 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 PCDHB12Q9Y5F1 795 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TANC1Q9C0D5 1861 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 GRXCR2A6NFK2 248 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 PAPSS1O43252 624 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TIMM44O43615 452 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 MYO1DO94832 1006 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TMEM63AO94886 807 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ALX3O95076 343 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ARIH2O95376 493 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CFBP00751 764 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 KITP10721 976 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 HOXA13P31271 388 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 HLCSP50747 726 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 MS4A2Q01362 244 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 OCA2Q04671 838 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 HSPA14Q0VDF9 509 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 BNIP3Q12983 259 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 NAB1Q13506 487 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CEACAM7Q14002 265 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CBX2Q14781 532 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CEP55Q53EZ4 464 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 GNASQ5JWF2 1037 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CCNJQ5T5M9 372 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 TTC33Q6PID6 262 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CXCL17Q6UXB2 119 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 C4orf22Q6V702 233 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 USP37Q86T82 979 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 GALNT13Q8IUC8 556 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 THNSL1Q8IYQ7 743 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ADGRF2Q8IZF7 708 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 FNIP1Q8TF40 1166 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 COPS5Q92905 334 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 KAT5Q92993 513 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CCDC127Q96BQ5 260 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 NRBF2Q96F24 287 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 ZNF486Q96H40 463 aaPredicted RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 EIF2AK1Q9BQI3 630 aaKnown RBP10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 AMNQ9BXJ7 453 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 CEP44Q9C0F1 390 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 EFCAB1Q9HAE3 211 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 AKIP1Q9NQ31 210 aa10.79□□□□□ -0.68
NIF3L1-204ENST00000409357 MARCOQ9UEW3 520 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms