RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 CCDC66A2RUB6 948 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 J3KR12 359 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 TMCC1O94876 653 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 ACADMP11310 421 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 CTNNA2P26232 953 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 TAZQ16635 292 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 MFSD7Q6UXD7 560 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 ARHGAP36Q6ZRI8 547 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 NT5DC3Q86UY8 548 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 OR2A12Q8NGT7 310 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 RLN3Q8WXF3 142 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 OR8D1Q8WZ84 308 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 EPC1Q9H2F5 836 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 SEMA4AQ9H3S1 761 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 SP110Q9HB58 689 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 CD93Q9NPY3 652 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 UBA2Q9UBT2 640 aaPredicted RBP20.68■□□□□ 0.9
PTCD3-202ENST00000409326 IPO11Q9UI26 975 aaKnown RBP20.68■□□□□ 0.9
PTCD3-202ENST00000409326 PPP2R2CQ9Y2T4 447 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 PCDHA3Q9Y5H8 950 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 ANKRD36A6QL64 1941 aa20.68■□□□□ 0.9
PTCD3-202ENST00000409326 PROB1E7EW31 1015 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 MCF2LO15068 1137 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 BNIP3LO60238 219 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 DNTTP04053 509 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 CDKN2BP42772 138 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 RECQLP46063 649 aaPredicted RBP20.67■□□□□ 0.9
PTCD3-202ENST00000409326 IL10RBQ08334 325 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 NUMA1Q14980 2115 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 SLC9A4Q6AI14 798 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 PEX26Q7Z412 305 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 DSG4Q86SJ6 1040 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 C11orf74Q86VG3 221 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 MMAAQ8IVH4 418 aaKnown RBP20.67■□□□□ 0.9
PTCD3-202ENST00000409326 PLPP6Q8IY26 295 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 EXD1Q8NHP7 514 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.67■□□□□ 0.9
PTCD3-202ENST00000409326 RBM41Q96IZ5 413 aaKnown RBP20.67■□□□□ 0.9
PTCD3-202ENST00000409326 MAK16Q9BXY0 300 aaKnown RBP20.67■□□□□ 0.9
PTCD3-202ENST00000409326 TNKS2Q9H2K2 1166 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 ITM2CQ9NQX7 267 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 AMFRQ9UKV5 643 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 SCML1Q9UN30 329 aa20.67■□□□□ 0.9
PTCD3-202ENST00000409326 FARP1Q9Y4F1 1045 aaPredicted RBP20.67■□□□□ 0.9
PTCD3-202ENST00000409326 TNRC6BQ9UPQ9 1833 aaKnown RBP20.67■□□□□ 0.9
PTCD3-202ENST00000409326 IGHV1OR15-9A0A0B4J2B8 117 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 ZRANB2O95218 330 aaKnown RBP eCLIP20.66■□□□□ 0.9
PTCD3-202ENST00000409326 GSRP00390 522 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 IGLV3-19P01714 112 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 TPMTP51580 245 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 GALNT2Q10471 571 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 SIM2Q14190 667 aaPredicted RBP20.66■□□□□ 0.9
PTCD3-202ENST00000409326 CST6Q15828 149 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 TTC31Q49AM3 519 aaPredicted RBP20.66■□□□□ 0.9
PTCD3-202ENST00000409326 SPOCD1Q6ZMY3 1216 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 CEP68Q76N32 757 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 LRRC49Q8IUZ0 686 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 RCOR2Q8IZ40 523 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 ATPAF2Q8N5M1 289 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 PLD5Q8N7P1 536 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 TM6SF2Q9BZW4 377 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 LZTFL1Q9NQ48 299 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 CYP8B1Q9UNU6 501 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 INVSQ9Y283 1065 aa20.66■□□□□ 0.9
PTCD3-202ENST00000409326 APOL1O14791 398 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 FTCDO95954 541 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 ADH1BP00325 375 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 IL1BP01584 269 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 ZFXP17010 805 aaPredicted RBP20.65■□□□□ 0.9
PTCD3-202ENST00000409326 PSMD8P48556 350 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 PEX5P50542 639 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 SNRPD1P62314 119 aaKnown RBP20.65■□□□□ 0.9
PTCD3-202ENST00000409326 GBE1Q04446 702 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 CCDC173Q0VFZ6 552 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 RFTN1Q14699 578 aaPredicted RBP20.65■□□□□ 0.9
PTCD3-202ENST00000409326 CARD16Q5EG05 197 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 TFDP3Q5H9I0 405 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 DPY19L3Q6ZPD9 716 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 RFX6Q8HWS3 928 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 FAM160A2Q8N612 972 aaPredicted RBP20.65■□□□□ 0.9
PTCD3-202ENST00000409326 FRMD1Q8N878 549 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 OR2AP1Q8NGE2 309 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 ZNF830Q96NB3 372 aaPredicted RBP20.65■□□□□ 0.9
PTCD3-202ENST00000409326 ZNF599Q96NL3 588 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 PABPC3Q9H361 631 aaKnown RBP20.65■□□□□ 0.9
PTCD3-202ENST00000409326 MBD1Q9UIS9 605 aaPredicted RBP20.65■□□□□ 0.9
PTCD3-202ENST00000409326 PPM1HQ9ULR3 514 aa20.65■□□□□ 0.9
PTCD3-202ENST00000409326 SDK1Q7Z5N4 2213 aa20.64■□□□□ 0.89
PTCD3-202ENST00000409326 MIF4GDA9UHW6 222 aaKnown RBP20.64■□□□□ 0.89
PTCD3-202ENST00000409326 C1QTNF3-AMACRE9PGA6 284 aa20.64■□□□□ 0.89
PTCD3-202ENST00000409326 MID1O15344 667 aa20.64■□□□□ 0.89
PTCD3-202ENST00000409326 MAFKO60675 156 aa20.64■□□□□ 0.89
PTCD3-202ENST00000409326 CTSLP07711 333 aa20.64■□□□□ 0.89
PTCD3-202ENST00000409326 C5AR1P21730 350 aa20.64■□□□□ 0.89
PTCD3-202ENST00000409326 BCKDHBP21953 392 aa20.64■□□□□ 0.89
PTCD3-202ENST00000409326 CHRNA3P32297 505 aa20.64■□□□□ 0.89
PTCD3-202ENST00000409326 SLC8A1P32418 973 aa20.64■□□□□ 0.89
PTCD3-202ENST00000409326 GARSP41250 739 aaKnown RBP20.64■□□□□ 0.89
PTCD3-202ENST00000409326 DNA2P51530 1060 aa20.64■□□□□ 0.89
PTCD3-202ENST00000409326 CCNHP51946 323 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms