RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 RAB44Q7Z6P3 723 aaPredicted RBP10.8□□□□□ -0.68
RPAIN-204ENST00000405578 C12orf40Q86WS4 652 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 ZNF354CQ86Y25 554 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 CCDC50Q8IVM0 306 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 KATNAL2Q8IYT4 538 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 RTL3Q8N8U3 475 aaKnown RBP10.8□□□□□ -0.68
RPAIN-204ENST00000405578 TSTD1Q8NFU3 115 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 EXD1Q8NHP7 514 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 HNRNPLLQ8WVV9 542 aaKnown RBP10.8□□□□□ -0.68
RPAIN-204ENST00000405578 MYEOVQ96EZ4 313 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 CSPG4P5Q96PW8 444 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 GOLPH3Q9H4A6 298 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 ELOVL2Q9NXB9 296 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 TRMT1Q9NXH9 659 aaKnown RBP10.8□□□□□ -0.68
RPAIN-204ENST00000405578 CWC15Q9P013 229 aaKnown RBP10.8□□□□□ -0.68
RPAIN-204ENST00000405578 DNAI1Q9UI46 699 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 PCDHA3Q9Y5H8 950 aa10.8□□□□□ -0.68
RPAIN-204ENST00000405578 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.8□□□□□ -0.68
RPAIN-204ENST00000405578 ATXN2Q99700 1313 aaKnown RBP10.8□□□□□ -0.68
RPAIN-204ENST00000405578 URB1O60287 2271 aaKnown RBP10.79□□□□□ -0.68
RPAIN-204ENST00000405578 A0A0U1RQJ8 604 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 FTCDO95954 541 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 ERCC2P18074 760 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 CTNNA2P26232 953 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 CD70P32970 193 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 CSKP41240 450 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 NDST2P52849 883 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 GEMIN4P57678 1058 aaKnown RBP10.79□□□□□ -0.68
RPAIN-204ENST00000405578 COPS2P61201 443 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 MRPS21P82921 87 aaKnown RBP10.79□□□□□ -0.68
RPAIN-204ENST00000405578 GNA12Q03113 381 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 TFDP2Q14188 446 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 DPYSL3Q14195 570 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 POLD3Q15054 466 aaPredicted RBP10.79□□□□□ -0.68
RPAIN-204ENST00000405578 RPS6KA1Q15418 735 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 ZNF423Q2M1K9 1284 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 PLEKHG6Q3KR16 790 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 HSF5Q4G112 596 aaPredicted RBP10.79□□□□□ -0.68
RPAIN-204ENST00000405578 ATP13A4Q4VNC1 1196 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 MBLAC2Q68D91 279 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 ANO7Q6IWH7 933 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 NT5DC3Q86UY8 548 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 NLRP14Q86W24 1093 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 CPNE8Q86YQ8 564 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 FAM71BQ8TC56 605 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 RAPGEF5Q92565 580 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 EZH1Q92800 747 aaPredicted RBP10.79□□□□□ -0.68
RPAIN-204ENST00000405578 LRIG1Q96JA1 1093 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 SPON2Q9BUD6 331 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 MAGEB5Q9BZ81 275 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 MAGEH1Q9H213 219 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 CCDC86Q9H6F5 360 aaKnown RBP10.79□□□□□ -0.68
RPAIN-204ENST00000405578 FSCN3Q9NQT6 498 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 KLHL11Q9NVR0 708 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 CLEC4EQ9ULY5 219 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 STARD13Q9Y3M8 1113 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 CAPN6Q9Y6Q1 641 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 ANAPC1Q9H1A4 1944 aa10.79□□□□□ -0.68
RPAIN-204ENST00000405578 MYO18AQ92614 2054 aaKnown RBP10.78□□□□□ -0.68
RPAIN-204ENST00000405578 ZSCAN5CA6NGD5 496 aaPredicted RBP10.78□□□□□ -0.68
RPAIN-204ENST00000405578 ARHGAP42A6NI28 874 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 TRIM24O15164 1050 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 ZBTB24O43167 697 aaPredicted RBP10.78□□□□□ -0.68
RPAIN-204ENST00000405578 DLDP09622 509 aaKnown RBP10.78□□□□□ -0.68
RPAIN-204ENST00000405578 IRAK1P51617 712 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 PLK1P53350 603 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 ECT2LQ008S8 904 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 SLC20A2Q08357 652 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 DPYSQ14117 519 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 GEN1Q17RS7 908 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 ANKRD20A8PQ5CZ79 823 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 FSCBQ5H9T9 825 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 PITRM1Q5JRX3 1037 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 CCDC181Q5TID7 509 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 CXorf57Q6NSI4 855 aaKnown RBP10.78□□□□□ -0.68
RPAIN-204ENST00000405578 RETSATQ6NUM9 610 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 BZW1Q7L1Q6 419 aaKnown RBP10.78□□□□□ -0.68
RPAIN-204ENST00000405578 LRRC49Q8IUZ0 686 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 CHPFQ8IZ52 775 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 UMODL1-AS1Q8N2C9 162 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 PHTF2Q8N3S3 785 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 HDDC3Q8N4P3 179 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 ZNF513Q8N8E2 541 aaPredicted RBP10.78□□□□□ -0.68
RPAIN-204ENST00000405578 DCAF4L2Q8NA75 395 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 MDM1Q8TC05 714 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 TSC1Q92574 1164 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 RNF25Q96BH1 459 aaPredicted RBP10.78□□□□□ -0.68
RPAIN-204ENST00000405578 P2RY11Q96G91 374 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 FEM1AQ9BSK4 669 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 GTPBP2Q9BX10 602 aaKnown RBP10.78□□□□□ -0.68
RPAIN-204ENST00000405578 ATP13A1Q9HD20 1204 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 MBD1Q9UIS9 605 aaPredicted RBP10.78□□□□□ -0.68
RPAIN-204ENST00000405578 SLC25A13Q9UJS0 675 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 PYCARDQ9ULZ3 195 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 RAXQ9Y2V3 346 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 JRKLQ9Y4A0 524 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 CELSR3Q9NYQ7 3312 aa10.78□□□□□ -0.68
RPAIN-204ENST00000405578 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 CXorf51AA0A1B0GTR3 108 aa10.77□□□□□ -0.69
RPAIN-204ENST00000405578 UPK3BL1B0FP48 263 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms