RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 IMP4Q96G21 291 aaKnown RBP26.07■■□□□ 1.76
CPNE1-205ENST00000401607 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.06■■□□□ 1.76
CPNE1-205ENST00000401607 TRAV19A0A0A6YYK7 116 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 RHOCP08134 193 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 LSP1P33241 339 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 NPY2RP49146 381 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 NIPAL4Q0D2K0 466 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 ZNF177Q13360 481 aaPredicted RBP26.06■■□□□ 1.76
CPNE1-205ENST00000401607 LBRQ14739 615 aaKnown RBP26.06■■□□□ 1.76
CPNE1-205ENST00000401607 SHHQ15465 462 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 TMCO4Q5TGY1 634 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 CXorf57Q6NSI4 855 aaKnown RBP26.06■■□□□ 1.76
CPNE1-205ENST00000401607 KDELC1Q6UW63 502 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 SETD3Q86TU7 594 aaPredicted RBP26.06■■□□□ 1.76
CPNE1-205ENST00000401607 UNC5BQ8IZJ1 945 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 MRGPRX2Q96LB1 330 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 FICDQ9BVA6 458 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 SLC46A2Q9BY10 475 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 KIF9Q9HAQ2 790 aa26.06■■□□□ 1.76
CPNE1-205ENST00000401607 A0A1W2PPM1 405 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 TMEM120BA0PK00 339 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 ILVBLA1L0T0 632 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 C1RP00736 705 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 DENND5AQ6IQ26 1287 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 LRRC6Q86X45 466 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 CTAGE3PQ8IX95 158 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 SHKBP1Q8TBC3 707 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 ZNF599Q96NL3 588 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 SAMD15Q9P1V8 674 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.05■■□□□ 1.76
CPNE1-205ENST00000401607 AP3B1O00203 1094 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 PMPCBO75439 489 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 MMP2P08253 660 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 INHBAP08476 426 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 TPH1P17752 444 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 PFKLP17858 780 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 ETFBP38117 255 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 DSC2Q02487 901 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 MPP3Q13368 585 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 MPP2Q14168 576 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 IHHQ14623 411 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 IL31Q6EBC2 164 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 CES3Q6UWW8 571 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 SLC26A11Q86WA9 606 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 TTC17Q96AE7 1141 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 FCRL3Q96P31 734 aaPredicted RBP26.05■■□□□ 1.76
CPNE1-205ENST00000401607 TGS1Q96RS0 853 aaKnown RBP26.05■■□□□ 1.76
CPNE1-205ENST00000401607 IL22Q9GZX6 179 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 TRABDQ9H4I3 376 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 CFAP97Q9P2B7 532 aa26.05■■□□□ 1.76
CPNE1-205ENST00000401607 DNMT3BQ9UBC3 853 aaKnown RBP26.05■■□□□ 1.76
CPNE1-205ENST00000401607 ATP9BO43861 1147 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 UGT1A9O60656 530 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 MOSPD3O75425 235 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 FAM155BO75949 473 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 SPANXN3Q5MJ09 141 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 HTR3DQ70Z44 454 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 TMEM135Q86UB9 458 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 ARRDC2Q8TBH0 407 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 ATXN2LQ8WWM7 1075 aaKnown RBP26.04■■□□□ 1.76
CPNE1-205ENST00000401607 TCEAL4Q96EI5 215 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 ACE2Q9BYF1 805 aaPredicted RBP26.04■■□□□ 1.76
CPNE1-205ENST00000401607 UGT1A7Q9HAW7 530 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 UGT1A10Q9HAW8 530 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 UGT1A8Q9HAW9 530 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 SENP1Q9P0U3 644 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 LSM7Q9UK45 103 aaKnown RBP26.04■■□□□ 1.76
CPNE1-205ENST00000401607 IKBKGQ9Y6K9 419 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 RPS6KL1Q9Y6S9 549 aa26.04■■□□□ 1.76
CPNE1-205ENST00000401607 MUSKO15146 869 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 KDELR3O43731 214 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 TBL1XO60907 577 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 POLBP06746 335 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 GLDCP23378 1020 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 HOXA9P31269 272 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 MAGEA10P43363 369 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-205ENST00000401607 ITKQ08881 620 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 HJURPQ8NCD3 748 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-205ENST00000401607 TADA1Q96BN2 335 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 CENPTQ96BT3 561 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 SPON2Q9BUD6 331 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 KCNK9Q9NPC2 374 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 ZNF180Q9UJW8 692 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 YBX2Q9Y2T7 364 aaKnown RBP26.03■■□□□ 1.76
CPNE1-205ENST00000401607 ACTL7AQ9Y615 435 aa26.03■■□□□ 1.76
CPNE1-205ENST00000401607 PTPN2P17706 415 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 CD86P42081 329 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 OXCT1P55809 520 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 WNT3AP56704 352 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 ERVK-21P61565 698 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 RANBP10Q6VN20 620 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 TTC16Q8NEE8 873 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 SAMD11Q96NU1 681 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 SMG9Q9H0W8 520 aaKnown RBP26.02■■□□□ 1.76
CPNE1-205ENST00000401607 SOX13Q9UN79 622 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 SH3BP1Q9Y3L3 701 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 TTC24A2A3L6 582 aaPredicted RBP26.02■■□□□ 1.76
CPNE1-205ENST00000401607 USP1O94782 785 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 GPM6BQ13491 265 aa26.02■■□□□ 1.76
CPNE1-205ENST00000401607 GPR158Q5T848 1215 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms