RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 RFX5P48382 616 aaPredicted RBP4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 THBS3P49746 956 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 RPS6KA3P51812 740 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 TRAF1Q13077 416 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 AP5B1Q2VPB7 878 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 SYTL3Q4VX76 610 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 Q5PR19 223 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 KRTAP5-11Q6L8G4 156 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 TMEM71Q6P5X7 295 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 CYP26C1Q6V0L0 522 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 SCAIQ8N9R8 606 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 IL17REQ8NFR9 667 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 B4GALNT2Q8NHY0 566 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 OIT3Q8WWZ8 545 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 RBM17Q96I25 401 aaKnown RBP4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 CADM1Q9BY67 442 aaKnown RBP4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 B3GNT4Q9C0J1 378 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 RNF146Q9NTX7 359 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 ZDHHC7Q9NXF8 308 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 CDH22Q9UJ99 828 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 ICKQ9UPZ9 632 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 RAP2CQ9Y3L5 183 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 RPS10-NUDT3A0A1W2PQS6 291 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 TARSL2A2RTX5 802 aaKnown RBP4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 I6L893 689 aaPredicted RBP4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 IRAK2O43187 625 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 SEPT4O43236 478 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 CCNT1O60563 726 aaKnown RBP4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 DDAH2O95865 285 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 HLA-DQA2P01906 255 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 KLKB1P03952 638 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 TK1P04183 234 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 CHRNB2P17787 502 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 MVDP53602 400 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 G3BP1Q13283 466 aaKnown RBP eCLIP4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 THOC5Q13769 683 aaKnown RBP4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 Q6ZTK2 550 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 FTSJ3Q8IY81 847 aaKnown RBP4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 FAR1Q8WVX9 515 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 PPM1MQ96MI6 270 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 CTDSP1Q9GZU7 261 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 SMC4Q9NTJ3 1288 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 HDAC6Q9UBN7 1215 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 DERAQ9Y315 318 aa4.78□□□□□ -1.64
SAMSN1-202ENST00000400564 STMND1H3BQB6 276 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 TMCC1O94876 653 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 UNGP13051 313 aaPredicted RBP4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 CD72P21854 359 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 PRKCHP24723 683 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 CDKN2AP42771 156 aaKnown RBP4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 PTPN9P43378 593 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 PPP3CCP48454 512 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 ARL4CP56559 192 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 SELENOVP59797 346 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 ACTR2P61160 394 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 BYSLQ13895 437 aaKnown RBP4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 IL13RA2Q14627 380 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 SH2D4BQ5SQS7 431 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 HYIQ5T013 277 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 KRBA2Q6ZNG9 492 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 TRIM74Q86UV6 250 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 TRIM73Q86UV7 250 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 FAM185AQ8N0U4 392 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 HORMAD2Q8N7B1 307 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 PDILTQ8N807 584 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 CEP70Q8NHQ1 597 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 SDCCAG3Q96C92 435 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 NEUROD6Q96NK8 337 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 FRG2BQ96QU4 278 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 IFT27Q9BW83 186 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 PLAC1Q9HBJ0 212 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 FBXO2Q9UK22 296 aaPredicted RBP4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 CRYL1Q9Y2S2 319 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 RPS6KL1Q9Y6S9 549 aa4.77□□□□□ -1.65
SAMSN1-202ENST00000400564 A0A1B0GVC2 190 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 GAGE12JA6NER3 117 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 DDTLA6NHG4 134 aaPredicted RBP4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 SMAD6O43541 496 aaKnown RBP4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 MBD4O95243 580 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 CBX6O95503 412 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 MTNR1AP48039 350 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 MCM2P49736 904 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 ARHGAP8P85298 464 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 GPR18Q14330 331 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 DUSP6Q16828 381 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 INTS11Q5TA45 600 aaKnown RBP4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 WDR5BQ86VZ2 330 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 HERC6Q8IVU3 1022 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 GABPB2Q8TAK5 448 aaPredicted RBP4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 SPPL3Q8TCT6 385 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 USP13Q92995 863 aaPredicted RBP4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 SEC62Q99442 399 aaKnown RBP4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 CXorf56Q9H5V9 222 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 KRCC1Q9NPI7 259 aaPredicted RBP4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 NCKIPSDQ9NZQ3 722 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 IFT80Q9P2H3 777 aaPredicted RBP4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 PDP2Q9P2J9 529 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 OSGIN2Q9Y236 505 aa4.76□□□□□ -1.65
SAMSN1-202ENST00000400564 DNAJC16Q9Y2G8 782 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms