RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 FGL2Q14314 439 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 ARSIQ5FYB1 569 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 C22orf39Q6P5X5 142 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 FOXR2Q6PJQ5 311 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 C11orf57Q6ZUT1 292 aaPredicted RBP12.2□□□□□ -0.46
LINC00544-201ENST00000400540 PTAR1Q7Z6K3 402 aaPredicted RBP12.2□□□□□ -0.46
LINC00544-201ENST00000400540 TFAP2DQ7Z6R9 452 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 TKTL2Q9H0I9 626 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 OSBPL2Q9H1P3 480 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 CPNE5Q9HCH3 593 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 ARHGEF38Q9NXL2 777 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 MPP6Q9NZW5 540 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 PCDHGC3Q9UN70 934 aa12.2□□□□□ -0.46
LINC00544-201ENST00000400540 RAD51BO15315 384 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 USP12O75317 370 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 CSO75390 466 aaKnown RBP12.19□□□□□ -0.46
LINC00544-201ENST00000400540 ZNF821O75541 412 aaPredicted RBP12.19□□□□□ -0.46
LINC00544-201ENST00000400540 LEFTY1O75610 366 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 PCDH8O95206 1070 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 AKT2P31751 481 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 PCBP4P57723 403 aaKnown RBP12.19□□□□□ -0.46
LINC00544-201ENST00000400540 KRT83P78385 493 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 SLC6A3Q01959 620 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 TMEM259Q4ZIN3 620 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 HS1BP3Q53T59 392 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 ARTNQ5T4W7 220 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 Q6ZSR6 202 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 ERN2Q76MJ5 926 aaKnown RBP12.19□□□□□ -0.46
LINC00544-201ENST00000400540 ENOSF1Q7L5Y1 443 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 SLC26A9Q7LBE3 791 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 ABI3BPQ7Z7G0 1075 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 ZNF248Q8NDW4 579 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 TMIEQ8NEW7 156 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 OR7D4Q8NG98 312 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 SHC3Q92529 594 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 HIC2Q96JB3 615 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 BMFQ96LC9 184 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 PPP1R9BQ96SB3 815 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 NPY6RQ99463 290 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 C2orf49Q9BVC5 232 aaPredicted RBP12.19□□□□□ -0.46
LINC00544-201ENST00000400540 DYRK4Q9NR20 520 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 DNAJC28Q9NX36 388 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 NLGN3Q9NZ94 848 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 APEX2Q9UBZ4 518 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 IL36AQ9UHA7 158 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 ACTL7AQ9Y615 435 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 WASF2Q9Y6W5 498 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 SCN8AQ9UQD0 1980 aa12.19□□□□□ -0.46
LINC00544-201ENST00000400540 POM121BA6NF01 834 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 K7ESM1 405 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 CASC3O15234 703 aaKnown RBP12.18□□□□□ -0.46
LINC00544-201ENST00000400540 PRNPP04156 253 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 NOS2P35228 1153 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 CXCR3P49682 368 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 SULT1E1P49888 294 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 RNASE9P60153 205 aaKnown RBP12.18□□□□□ -0.46
LINC00544-201ENST00000400540 CFHR1Q03591 330 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 FZD2Q14332 565 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 TPRG1LQ5T0D9 272 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 NEK5Q6P3R8 708 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 DPY19L3Q6ZPD9 716 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 SLC47A2Q86VL8 602 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 CREBRFQ8IUR6 639 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 ELOA2Q8IYF1 753 aaPredicted RBP12.18□□□□□ -0.46
LINC00544-201ENST00000400540 DCAF4L2Q8NA75 395 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 LSM14AQ8ND56 463 aaKnown RBP12.18□□□□□ -0.46
LINC00544-201ENST00000400540 ZNF548Q8NEK5 533 aaPredicted RBP12.18□□□□□ -0.46
LINC00544-201ENST00000400540 IFI44Q8TCB0 444 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 CCDC114Q96M63 670 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 ZNF578Q96N58 590 aaPredicted RBP12.18□□□□□ -0.46
LINC00544-201ENST00000400540 DEPDC7Q96QD5 511 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC00544-201ENST00000400540 HDAC8Q9BY41 377 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 WDCPQ9H6R7 721 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 ASCL3Q9NQ33 180 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 GPR27Q9NS67 375 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 KLF15Q9UIH9 416 aa12.18□□□□□ -0.46
LINC00544-201ENST00000400540 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
LINC00544-201ENST00000400540 PIEZO2Q9H5I5 2752 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 MYO18BQ8IUG5 2567 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 A0A1W2PNU3 283 aaPredicted RBP12.17□□□□□ -0.46
LINC00544-201ENST00000400540 PMS2P1A4D2B8 440 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 A6NNZ2 444 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 SCAMP1O15126 338 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 GADD45BO75293 160 aaPredicted RBP12.17□□□□□ -0.46
LINC00544-201ENST00000400540 PAK4O96013 591 aaPredicted RBP12.17□□□□□ -0.46
LINC00544-201ENST00000400540 ALPPL2P10696 532 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 ADRB3P13945 408 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 TGM2P21980 687 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 CLCN1P35523 988 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 DRAP1Q14919 205 aaPredicted RBP12.17□□□□□ -0.46
LINC00544-201ENST00000400540 CDKN3Q16667 212 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 C3orf38Q5JPI3 329 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 BRMS1LQ5PSV4 323 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 ARHGAP40Q5TG30 622 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 TRNP1Q6NT89 227 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 CRTC1Q6UUV9 634 aa12.17□□□□□ -0.46
LINC00544-201ENST00000400540 KYAT3Q6YP21 454 aaKnown RBP12.17□□□□□ -0.46
LINC00544-201ENST00000400540 PARS2Q7L3T8 475 aaKnown RBP12.17□□□□□ -0.46
LINC00544-201ENST00000400540 ZNF605Q86T29 641 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms