RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ACSS3Q9H6R3 686 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 PALMDQ9NP74 551 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 SERPINB1P30740 379 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 SAMD4BQ5PRF9 694 aaKnown RBP18.41■□□□□ 0.54
COL18A1-204ENST00000400337 PCDH20Q8N6Y1 951 aaKnown RBP18.41■□□□□ 0.54
COL18A1-204ENST00000400337 GPR152Q8TDT2 470 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 UTP15Q8TED0 518 aaKnown RBP18.41■□□□□ 0.54
COL18A1-204ENST00000400337 MOXD2PA6NHM9 499 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 LDLRP01130 860 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 TSHRP16473 764 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 MMP8P22894 467 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 GRIK3Q13003 919 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 HGSNATQ68CP4 663 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 LBX2Q6XYB7 198 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 ADAM28Q9UKQ2 775 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 DYRK3O43781 588 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 PEX10O60683 326 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 FAM58BPP0C7Q3 252 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 PIK3CGP48736 1102 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 MARK4Q96L34 752 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 LHX5Q9H2C1 402 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 PCDH18Q9HCL0 1135 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 SHPRHQ149N8 1683 aa18.41■□□□□ 0.54
COL18A1-204ENST00000400337 CSH1P0DML2 217 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 CSH2P0DML3 217 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 GPR15P49685 360 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 BST1Q10588 318 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 SH3BP5LQ7L8J4 393 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 ZNF438Q7Z4V0 828 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 EXOC3L1Q86VI1 746 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 TPD52L3Q96J77 140 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 EXOC2Q96KP1 924 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 CPXM1Q96SM3 734 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 OMDQ99983 421 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 MMADHCQ9H3L0 296 aaPredicted RBP18.4■□□□□ 0.54
COL18A1-204ENST00000400337 KLQ9UEF7 1012 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 TNPO3Q9Y5L0 923 aaKnown RBP18.4■□□□□ 0.54
COL18A1-204ENST00000400337 PSMD12O00232 456 aaPredicted RBP18.4■□□□□ 0.54
COL18A1-204ENST00000400337 TBL1XO60907 577 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 NOL4O94818 638 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 CST3P01034 146 aaPredicted RBP18.4■□□□□ 0.54
COL18A1-204ENST00000400337 EIF2B5Q13144 721 aaKnown RBP18.4■□□□□ 0.54
COL18A1-204ENST00000400337 CCDC157Q569K6 752 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 FAM45BPQ6NSW5 357 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 TMEM26Q6ZUK4 368 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 NKAPQ8N5F7 415 aaKnown RBP18.4■□□□□ 0.54
COL18A1-204ENST00000400337 FAM45AQ8TCE6 357 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 RAD18Q9NS91 495 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 SYBUQ9NX95 663 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 MMP3P08254 477 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 S100A3P33764 101 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 CLCN5P51795 746 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 CCDC149Q6ZUS6 474 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 FAM228AQ86W67 206 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 TMEM139Q8IV31 216 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 KCTD4Q8WVF5 259 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 NDEL1Q9GZM8 345 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 ERVK-5Q9HDB9 667 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 COL20A1Q9P218 1284 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 RPS6KB2Q9UBS0 482 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 TRAV19A0A0A6YYK7 116 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 SMIM35A0A1B0GVV1 85 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 H3BMM5 538 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 ITGA2BP08514 1039 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 TFEBP19484 476 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 LRPAP1P30533 357 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 NEK3P51956 506 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 LRRC74BQ6ZQY2 392 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 ZNF621Q6ZSS3 439 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 SUSD6Q92537 303 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 CORO1BQ9BR76 489 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 TBC1D3BA6NDS4 549 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 MAP3K13O43283 966 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 HSMCR30P0CW71 290 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 ATP5F1P24539 256 aaPredicted RBP18.4■□□□□ 0.54
COL18A1-204ENST00000400337 SNRPD1P62314 119 aaKnown RBP18.4■□□□□ 0.54
COL18A1-204ENST00000400337 ACSM2AQ08AH3 577 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 ACSM2BQ68CK6 577 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 CHMP1BQ7LBR1 199 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 LRRC49Q8IUZ0 686 aa18.4■□□□□ 0.54
COL18A1-204ENST00000400337 NMD3Q96D46 503 aaKnown RBP18.4■□□□□ 0.54
COL18A1-204ENST00000400337 TCRBV9S1A1TA0A576 114 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 NT5C1B-RDH14C9J2C7 533 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 PRR23D1E9PI22 279 aaPredicted RBP18.39■□□□□ 0.53
COL18A1-204ENST00000400337 PAPSS1O43252 624 aaPredicted RBP18.39■□□□□ 0.53
COL18A1-204ENST00000400337 CYP7B1O75881 506 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 PRR23D2P0DMB1 279 aaPredicted RBP18.39■□□□□ 0.53
COL18A1-204ENST00000400337 LBPP18428 481 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 GRIA4P48058 902 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 USP41Q3LFD5 358 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 STK32CQ86UX6 486 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 SYT12Q8IV01 421 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 TBCDQ9BTW9 1192 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 CNTNAP1P78357 1384 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 ALOX15BO15296 676 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 CACNA2D1P54289 1103 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 CTBP1Q13363 440 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 PDK4Q16654 411 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 TSHZ1Q6ZSZ6 1077 aa18.39■□□□□ 0.53
COL18A1-204ENST00000400337 DET1Q7L5Y6 550 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms