RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 FAM71AQ8IYT1 594 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 CBR4Q8N4T8 237 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 ANKRD52Q8NB46 1076 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 RNF145Q96MT1 663 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 MTMR9Q96QG7 549 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 C17orf75Q9HAS0 396 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 VANGL2Q9ULK5 521 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 DGKBQ9Y6T7 804 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 TCRBV9S1A1TA0A576 114 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 USP17L5A8MUK1 530 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 MYO1GB0I1T2 1018 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 SULT1B1O43704 296 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 NMT2O60551 498 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 SLC4A1P02730 911 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 ANXA6P08133 673 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 GPD1P21695 349 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 SELPLGQ14242 412 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 CCDC142Q17RM4 750 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 ZNF517Q6ZMY9 492 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 DCLK2Q8N568 766 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 EPS8L1Q8TE68 723 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 ACAD9Q9H845 621 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 PLEKHA5Q9HAU0 1116 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 NGRNQ9NPE2 291 aaKnown RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 NECTIN3Q9NQS3 549 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 TBC1D22BQ9NU19 505 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 CNOT6Q9ULM6 557 aaKnown RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 RUVBL2Q9Y230 463 aaKnown RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 ACOT9Q9Y305 439 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 PCDHB12Q9Y5F1 795 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 TCRBV5S4A2TA0A5A2 114 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 TESPA1A2RU30 521 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 ANKRD34BA5PLL1 514 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 PTGES3LE9PB15 166 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 TPP1O14773 563 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 RECQL5O94762 991 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 MYL3P08590 195 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 GNL1P36915 607 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 POLD2P49005 469 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 MARCKSL1P49006 195 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 CASP4P49662 377 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 BST2Q10589 180 aaKnown RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 OTUD3Q5T2D3 398 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 LIPMQ5VYY2 423 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 DENND1BQ6P3S1 775 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 SLC7A5P1Q8MH63 180 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 ELMOD1Q8N336 334 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 ELMO2Q96JJ3 720 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 IL1RL2Q9HB29 575 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 VPS28Q9UK41 221 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 A0A0B4J269 797 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 ANKRD63C9JTQ0 380 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 RGS10O43665 173 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 STAT3P40763 770 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 SNAPC2Q13487 334 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 TRIP4Q15650 581 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 SLC30A10Q6XR72 485 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 KIF18BQ86Y91 864 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 SMG8Q8ND04 991 aaKnown RBP10.1□□□□□ -0.79
PTPRM-203ENST00000400060 IFT43Q96FT9 208 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 GON7Q9BXV9 100 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 MYH8P13535 1937 aa10.1□□□□□ -0.79
PTPRM-203ENST00000400060 HACD1B0YJ81 288 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 H7C0S8 307 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 INO80B-WBP1J3KQ70 363 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 SOAT2O75908 522 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 DHFRP00374 187 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 TFPTP0C1Z6 253 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 HSD17B4P51659 736 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 AARS2Q5JTZ9 985 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 FOXB2Q5VYV0 432 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 NAPEPLDQ6IQ20 393 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 RASAL3Q86YV0 1011 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ABRAQ8N0Z2 381 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 DEPDC4Q8N2C3 294 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 FAM109AQ8N4B1 249 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 CCDC185Q8N715 623 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 RNF148Q8N7C7 305 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 NKX2-3Q8TAU0 364 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 GTPBP2Q9BX10 602 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 MTMR12Q9C0I1 747 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 DHX35Q9H5Z1 703 aaKnown RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ARMC7Q9H6L4 198 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 LRRC4Q9HBW1 653 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 IFT80Q9P2H3 777 aaPredicted RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 SLC39A10Q9ULF5 831 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 TESMINQ9Y4I5 508 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 TLL2Q9Y6L7 1015 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 NUMBLQ9Y6R0 609 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 PMF1-BGLAPU3KQ54 211 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ZNF335Q9H4Z2 1342 aaPredicted RBP10.09□□□□□ -0.79
PTPRM-203ENST00000400060 DCAF8L1A6NGE4 600 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 PIGNO95427 931 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 NFATC3Q12968 1075 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 IKBKEQ14164 716 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 PHKG1Q16816 387 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ZNF699Q32M78 642 aa10.09□□□□□ -0.79
PTPRM-203ENST00000400060 ZNF568Q3ZCX4 644 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms