RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 PTBP2Q9UKA9 531 aaKnown RBP8.48□□□□□ -1.05
CHD8-201ENST00000399982 PRKAB1Q9Y478 270 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 G3V2T6 193 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 CCNCP24863 283 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 RPA1P27694 616 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 PDIA6Q15084 440 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 FIG4Q92562 907 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 C12orf66Q96MD2 445 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 ZNF285Q96NJ3 590 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 LACRTQ9GZZ8 138 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 NINJ2Q9NZG7 142 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 SUCOQ9UBS9 1254 aaKnown RBP8.48□□□□□ -1.05
CHD8-201ENST00000399982 IGSF9BQ9UPX0 1349 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 A0A1W2PQ72 361 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 LDOC1O95751 146 aaPredicted RBP8.48□□□□□ -1.05
CHD8-201ENST00000399982 COX4I1P13073 169 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 F8A1P23610 371 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 RGS8P57771 180 aaPredicted RBP8.48□□□□□ -1.05
CHD8-201ENST00000399982 USP46P62068 366 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 MRPS22P82650 360 aaKnown RBP8.48□□□□□ -1.05
CHD8-201ENST00000399982 NCOA4Q13772 614 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 RNASE12Q5GAN4 147 aaKnown RBP8.48□□□□□ -1.05
CHD8-201ENST00000399982 ERICH5Q6P6B1 374 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 KBTBD2Q8IY47 623 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 GPER1Q99527 375 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 TNFSF13BQ9Y275 285 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 C2orf71A6NGG8 1288 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 PRH1P02810 166 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 ERCC2P18074 760 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 PON1P27169 355 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 TXNDC11Q6PKC3 985 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 FRMD7Q6ZUT3 714 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 DENND6BQ8NEG7 585 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 VAT1Q99536 393 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 POLR3FQ9H1D9 316 aaPredicted RBP8.48□□□□□ -1.05
CHD8-201ENST00000399982 SLC6A15Q9H2J7 730 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 MAGEL2Q9UJ55 1249 aa8.48□□□□□ -1.05
CHD8-201ENST00000399982 LEF1Q9UJU2 399 aaPredicted RBP8.48□□□□□ -1.05
CHD8-201ENST00000399982 PTGES3LE9PB15 166 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 SLC22A1O15245 554 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 ENDOD1O94919 500 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 NTRK1P04629 796 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 ATF4P18848 351 aaPredicted RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 RPL3P39023 403 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 CLK3P49761 638 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 MECP2P51608 486 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 TMEM132BQ14DG7 1078 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 CNSTQ6PJW8 725 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 DNAJB7Q7Z6W7 309 aaPredicted RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 ZNF655Q8N720 491 aaPredicted RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 PACRGLQ8N7B6 248 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 TRMOQ9BU70 441 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 DPY30Q9C005 99 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 THAP2Q9H0W7 228 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 EPB41L1Q9H4G0 881 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 EBF2Q9HAK2 575 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 BTBD19C9JJ37 291 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 PGK1P00558 417 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 HNF4AP41235 474 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 AUHQ13825 339 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 PTPAQ15257 358 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 N4BP2L1Q5TBK1 243 aaPredicted RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 LRRC38Q5VT99 294 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 IQCKQ8N0W5 287 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 CARNMT1Q8N4J0 409 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 NSUN6Q8TEA1 469 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 CCDC86Q9H6F5 360 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 GPRC5DQ9NZD1 345 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 ZNF224Q9NZL3 707 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 GPN3Q9UHW5 284 aaPredicted RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 GIT1Q9Y2X7 761 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 TNPO3Q9Y5L0 923 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 NOTOA8MTQ0 251 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 ENTPD5O75356 428 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 GRAP2O75791 330 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 MAPTP10636 758 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 SBK1Q52WX2 424 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 CCDC28AQ8IWP9 274 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 SGCDQ92629 289 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 PNMA5Q96PV4 448 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 RIOK2Q9BVS4 552 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 AHSPQ9NZD4 102 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 SRP68Q9UHB9 627 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 PCDHA10Q9Y5I2 948 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 FRMPD4Q14CM0 1322 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 CHADO15335 359 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 CHRNGP07510 517 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 SNRPB2P08579 225 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 CTSHP09668 335 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 PPIBP23284 216 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 NAMPTP43490 491 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 INSCQ1MX18 579 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 GPR107Q5VW38 600 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 SLC9A4Q6AI14 798 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 PIWIL4Q7Z3Z4 852 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 DNAJC10Q8IXB1 793 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 TAMM41Q96BW9 452 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 MTFMTQ96DP5 389 aaKnown RBP8.47□□□□□ -1.05
CHD8-201ENST00000399982 MND1Q9BWT6 205 aa8.47□□□□□ -1.05
CHD8-201ENST00000399982 ANKEF1Q9NU02 776 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms