RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 DDX3XO00571 662 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 VILLO15195 856 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 RAMP2O60895 175 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 RTN2O75298 545 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 ZNF821O75541 412 aaPredicted RBP15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 TBC1D3HP0C7X1 549 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 HTR7P34969 479 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 ACVRL1P37023 503 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 CTSKP43235 329 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 UBASH3AP57075 661 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 ZNF423Q2M1K9 1284 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 SKOR2Q2VWA4 1001 aaPredicted RBP15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 ZSCAN23Q3MJ62 389 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 PIP5KL1Q5T9C9 394 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 TBC1D3GQ6DHY5 549 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 TBC1D3CQ6IPX1 549 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 SCYL2Q6P3W7 929 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 DBX2Q6ZNG2 339 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 TMC6Q7Z403 805 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 ADAT2Q7Z6V5 191 aaKnown RBP15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 TRIM69Q86WT6 500 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 NAXDQ8IW45 347 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 PLPP6Q8IY26 295 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 TBC1D3Q8IZP1 549 aaPredicted RBP15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 RTL3Q8N8U3 475 aaKnown RBP15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 FNIP1Q8TF40 1166 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 SYN2Q92777 582 aaPredicted RBP15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 ISG20Q96AZ6 181 aaKnown RBP15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 SKA1Q96BD8 255 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 SLC6A18Q96N87 628 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 EPAS1Q99814 870 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 PREBQ9HCU5 417 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 TM7SF3Q9NS93 570 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 IL36AQ9UHA7 158 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 DNAI1Q9UI46 699 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 DMTF1Q9Y222 760 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 FNDC3AQ9Y2H6 1198 aaKnown RBP15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 SNX11Q9Y5W9 270 aa15.18■□□□□ 0.02
SMIM11A-203ENST00000399299 ZSCAN5CA6NGD5 496 aaPredicted RBP15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 WASH4PA8MWX3 477 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 EIF3CLB5ME19 914 aaKnown RBP15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 PLK4O00444 970 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 KPNA3O00505 521 aaPredicted RBP15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 SH3BP5O60239 455 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 DFNA5O60443 496 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 CD160O95971 181 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 FTLP02792 175 aaPredicted RBP15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 CD38P28907 300 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 EPHB2P29323 1055 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 YBEYP58557 167 aaPredicted RBP15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 TAS2R38P59533 333 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 PPP2CBP62714 309 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 PPP2CAP67775 309 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 OGDHQ02218 1023 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 NEK5Q6P3R8 708 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 DPY19L3Q6ZPD9 716 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 PRPF39Q86UA1 669 aaKnown RBP15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 PYROXD2Q8N2H3 581 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 CHST14Q8NCH0 376 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 TRIM11Q96F44 468 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 PPP1R16AQ96I34 528 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 EIF3CQ99613 913 aaKnown RBP15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 HDAC8Q9BY41 377 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 TNKS2Q9H2K2 1166 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 CATSPERBQ9H7T0 1116 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 IL21RQ9HBE5 538 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 DYRK4Q9NR20 520 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 DONSONQ9NYP3 566 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 ARHGAP20Q9P2F6 1191 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 HPCAL4Q9UM19 191 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 WASF3Q9UPY6 502 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 BZW2Q9Y6E2 419 aaKnown RBP15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 SCINQ9Y6U3 715 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 WASF2Q9Y6W5 498 aa15.17■□□□□ 0.02
SMIM11A-203ENST00000399299 AKAP13Q12802 2813 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 KMT2BQ9UMN6 2715 aaPredicted RBP15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 A0A1W2PR77 199 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 TMEM191CA6NGB0 347 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 FGF10O15520 208 aaPredicted RBP15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 FLRT2O43155 660 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 ATMINO43313 823 aaPredicted RBP15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 MYBL1P10243 752 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 PSMA2P25787 234 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 CCT8P50990 548 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 C21orf59P57076 290 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 SIM1P81133 766 aaPredicted RBP15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 SUZ12Q15022 739 aaKnown RBP15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 POLD3Q15054 466 aaPredicted RBP15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 POM121L1PQ3SYA9 428 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 CARD16Q5EG05 197 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 HGSNATQ68CP4 663 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 NAPEPLDQ6IQ20 393 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 LAYNQ6UX15 382 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 GRIN3AQ8TCU5 1115 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 ARRDC3Q96B67 414 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 SERAC1Q96JX3 654 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 CNTNAP3BQ96NU0 1288 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 HEPHQ9BQS7 1158 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 CNTNAP3Q9BZ76 1288 aa15.16■□□□□ 0.02
SMIM11A-203ENST00000399299 ISCUQ9H1K1 167 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms