RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 PCDHA11Q9Y5I1 949 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 CHD5Q8TDI0 1954 aa15.41■□□□□ 0.06
COL25A1-201ENST00000399126 CCDC78A2IDD5 438 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 ACSL4O60488 711 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 SUN1O94901 812 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 OAS1P00973 400 aaKnown RBP15.4■□□□□ 0.06
COL25A1-201ENST00000399126 CTSAP10619 480 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 PRKCHP24723 683 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 OR1E1P30953 314 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 ZXDBP98169 803 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 VEPH1Q14D04 833 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 TXNDC8Q6A555 127 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 MCOLN1Q9GZU1 580 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 HSFX1Q9UBD0 423 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 PRKAG2Q9UGJ0 569 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 FETUBQ9UGM5 382 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 PCDHGA4Q9Y5G9 962 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 ACTL7AQ9Y615 435 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 CAPN7Q9Y6W3 813 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 PRRC2BQ5JSZ5 2229 aaKnown RBP15.4■□□□□ 0.06
COL25A1-201ENST00000399126 SPAG6O75602 509 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 GJB3O75712 270 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 IMPDH2P12268 514 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 KRT4P19013 534 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 CORO1AP31146 461 aaKnown RBP15.4■□□□□ 0.06
COL25A1-201ENST00000399126 ERVFC1P60507 584 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 ZNF33AQ06730 810 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 SF3A3Q12874 501 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL25A1-201ENST00000399126 PPIGQ13427 754 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL25A1-201ENST00000399126 TMC7Q7Z402 723 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 IPMKQ8NFU5 416 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 OVCA2Q8WZ82 227 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 TRMT2BQ96GJ1 504 aaKnown RBP15.4■□□□□ 0.06
COL25A1-201ENST00000399126 CEP295NLQ96MC4 621 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 FCRL3Q96P31 734 aaPredicted RBP15.4■□□□□ 0.06
COL25A1-201ENST00000399126 ATXN3LQ9H3M9 355 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 IL21Q9HBE4 155 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 GLOD4Q9HC38 313 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 ZFP37Q9Y6Q3 630 aaPredicted RBP15.4■□□□□ 0.06
COL25A1-201ENST00000399126 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.4■□□□□ 0.06
COL25A1-201ENST00000399126 A0A0D9SEW6 157 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 HIDE1A8MVS5 230 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 F5H5T6 163 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 ATP9BO43861 1147 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 INHBAP08476 426 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 DNAJB1P25685 340 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 BMPR2Q13873 1038 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 IHHQ14623 411 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 QPCTQ16769 361 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 CLP1Q92989 425 aaKnown RBP15.4■□□□□ 0.06
COL25A1-201ENST00000399126 SERAC1Q96JX3 654 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 CASS4Q9NQ75 786 aa15.4■□□□□ 0.06
COL25A1-201ENST00000399126 MIA3Q5JRA6 1907 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 NDUFAB1O14561 156 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 CACNG3O60359 315 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 TSPAN3O60637 253 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 ARHGEF15O94989 841 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 RPA3P35244 121 aaPredicted RBP15.39■□□□□ 0.05
COL25A1-201ENST00000399126 HARS2P49590 506 aaKnown RBP15.39■□□□□ 0.05
COL25A1-201ENST00000399126 NDST2P52849 883 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 EPHB3P54753 998 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 CYP4F8P98187 520 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 RASA2Q15283 850 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 MICALCLQ6ZW33 695 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 TAX1BP1Q86VP1 789 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 LRRC6Q86X45 466 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 ZFRQ96KR1 1074 aaKnown RBP15.39■□□□□ 0.05
COL25A1-201ENST00000399126 CCT8L2Q96SF2 557 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 RXFP1Q9HBX9 757 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 MOCS1Q9NZB8 636 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 FNIP2Q9P278 1114 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 INSL6Q9Y581 213 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 ATXN2Q99700 1313 aaKnown RBP15.39■□□□□ 0.05
COL25A1-201ENST00000399126 DENND4CQ5VZ89 1909 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 DYTNA2CJ06 578 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 FAM159BA6NKW6 160 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 RAMP2O60895 175 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 PMPCBO75439 489 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 CXCL14O95715 111 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 F11P03951 625 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 GJA1P17302 382 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 ETFBP38117 255 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 CCT5P48643 541 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 KPNA1P52294 538 aaPredicted RBP15.39■□□□□ 0.05
COL25A1-201ENST00000399126 WDR4P57081 412 aaKnown RBP15.39■□□□□ 0.05
COL25A1-201ENST00000399126 POLD3Q15054 466 aaPredicted RBP15.39■□□□□ 0.05
COL25A1-201ENST00000399126 STEAP4Q687X5 459 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 KLHDC10Q6PID8 442 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 HERC6Q8IVU3 1022 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 ZNF276Q8N554 614 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 ZNF778Q96MU6 729 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 CDK5RAP1Q96SZ6 601 aaKnown RBP15.39■□□□□ 0.05
COL25A1-201ENST00000399126 TCF25Q9BQ70 676 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 KLF16Q9BXK1 252 aaPredicted RBP15.39■□□□□ 0.05
COL25A1-201ENST00000399126 SP110Q9HB58 689 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 NT5MQ9NPB1 228 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 AGO1Q9UL18 857 aaKnown RBP15.39■□□□□ 0.05
COL25A1-201ENST00000399126 ACTL7BQ9Y614 415 aa15.39■□□□□ 0.05
COL25A1-201ENST00000399126 GMNCA6NCL1 334 aa15.38■□□□□ 0.05
COL25A1-201ENST00000399126 A6NNZ2 444 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms