RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 CALML6Q8TD86 181 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 UTP4Q969X6 686 aaKnown RBP18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 VPS39Q96JC1 886 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 FAM167BQ9BTA0 163 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 DNAJC28Q9NX36 388 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 NOP53Q9NZM5 478 aaKnown RBP18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TMEM216Q9P0N5 145 aa18■□□□□ 0.47
HLA-DQB1-204ENST00000399084 DRGXA6NNA5 263 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CAPN14A8MX76 684 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 GYG2O15488 501 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PAPSS2O95340 614 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 C2P06681 752 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 IBSPP21815 317 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 AQP5P55064 265 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 LHX8Q68G74 356 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 KIAA0930Q6ICG6 404 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 DENND5AQ6IQ26 1287 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 GALNT7Q86SF2 657 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ZC3HC1Q86WB0 502 aaKnown RBP17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TMPRSS6Q8IU80 811 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 FSD1LQ9BXM9 530 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 C1orf21Q9H246 121 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 EBF2Q9HAK2 575 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CD248Q9HCU0 757 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TCAF1Q9Y4C2 921 aa17.99■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ENPP3O14638 875 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MSI1O43347 362 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 B4GALT3O60512 393 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TRIM13O60858 407 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PARNO95453 639 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 OR4Q2P0C623 313 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 NMBRP28336 390 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CRABP2P29373 138 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CCNG1P51959 295 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 KPNA2P52292 529 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ABCE1P61221 599 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PARP15Q460N3 678 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 FAM171A1Q5VUB5 890 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 METTL21CQ5VZV1 264 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ANKS3Q6ZW76 656 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CEP57Q86XR8 500 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TEX26Q8N6G2 289 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 SEPT8Q92599 483 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 AGAP2Q99490 1192 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 NMRAL1Q9HBL8 299 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 IARS2Q9NSE4 1012 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ARL8BQ9NVJ2 186 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PCDHB12Q9Y5F1 795 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 HEATR9A2RTY3 570 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 F8W810 466 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PITPNM1O00562 1244 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 GSC2O15499 205 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 IGLV3-27P01718 113 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PRKCGP05129 697 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 AOC1P19801 751 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MAPKAPK2P49137 400 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 SLC12A1Q13621 1099 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 DDR2Q16832 855 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PIK3R6Q5UE93 754 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MARC1Q5VT66 337 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 C16orf46Q6P387 395 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 C10orf107Q8IVU9 208 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 FAM13CQ8NE31 585 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 AGAP11Q8TF27 550 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PEX13Q92968 403 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 FBXO32Q969P5 355 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 IMP4Q96G21 291 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 RILPQ96NA2 401 aa17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 FBXO6Q9NRD1 293 aaPredicted RBP17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PRG3Q9Y2Y8 225 aaPredicted RBP17.98■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TBC1D4O60343 1298 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MAGEC1O60732 1142 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TPH1P17752 444 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 OLIG2Q13516 323 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TSNAXIP1Q2TAA8 658 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 DNAL1Q4LDG9 190 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MS4A13Q5J8X5 152 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 PPM1JQ5JR12 505 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 IPMKQ8NFU5 416 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 FICDQ9BVA6 458 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 NMUR2Q9GZQ4 415 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ATP13A1Q9HD20 1204 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TREX1Q9NSU2 369 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 UBP1Q9NZI7 540 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 MARCH2Q9P0N8 246 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 GMIPQ9P107 970 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 SLC17A6Q9P2U8 582 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 DNAJB4Q9UDY4 337 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 TAGLN3Q9UI15 199 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 DNAJC16Q9Y2G8 782 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 SHROOM3Q8TF72 1996 aa17.97■□□□□ 0.47
HLA-DQB1-204ENST00000399084 CCDC195A0A1B0GUA6 201 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 HLA-DQB2P05538 268 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ZDHHC11BP0C7U3 371 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 HAPLN1P10915 354 aaPredicted RBP17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 KCNA4P22459 653 aa17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 ARCN1P48444 511 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-204ENST00000399084 IL10RBQ08334 325 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms