RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 FAM25AB3EWG3 89 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 FAM25CB3EWG5 89 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 FAM25GB3EWG6 89 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 CNPP09543 421 aaKnown RBP14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 SEC13P55735 322 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 DGKKQ5KSL6 1271 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 DSELQ8IZU8 1212 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 TAGLN3Q9UI15 199 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 IGKV6D-41A0A0C4DH26 115 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 LRRC14BA6NHZ5 514 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 FAM220BPB1ANY3 271 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 PPP1R11O60927 126 aaPredicted RBP14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 EOMESO95936 686 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 ARF4P18085 180 aaPredicted RBP14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 HSPA13P48723 471 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 TBCELQ5QJ74 424 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 NYAP1Q6ZVC0 841 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 C16orf62Q7Z3J2 963 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 KRT77Q7Z794 578 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 ACTRT1Q8TDG2 376 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 SH3GL1Q99961 368 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 POMKQ9H5K3 350 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 COMMD8Q9NX08 183 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 TAS2R13Q9NYV9 303 aa14.43□□□□□ -0.1
PCDHA11-201ENST00000398640 TBC1D3DA0A087WVF3 549 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TBC1D3IA0A087WXS9 549 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TBC1D3EA0A087X179 549 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TBC1D3KA0A087X1G2 549 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 MAGEB16A2A368 324 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TBC1D3FA6NER0 549 aaPredicted RBP14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TBC1D3LB9A6J9 549 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TK2O00142 265 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 ZBTB14O43829 449 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 ACSL4O60488 711 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 DNTTP04053 509 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TBC1D3HP0C7X1 549 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 ZCCHC18P0CG32 403 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 PGAM1P18669 254 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 SKIV2L2P42285 1042 aaKnown RBP14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 BRCC3P46736 316 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 GTF2BQ00403 316 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 GPR158Q5T848 1215 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TBC1D3GQ6DHY5 549 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TBC1D3CQ6IPX1 549 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TBC1D3Q8IZP1 549 aaPredicted RBP14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 ZNF655Q8N720 491 aaPredicted RBP14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 MORF4L1Q9UBU8 362 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 SEPT3Q9UH03 358 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 GTF2IRD1Q9UHL9 959 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 RGPD5Q99666 1765 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 IRS2Q9Y4H2 1338 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 ZNF839A8K0R7 811 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 BUD23O43709 281 aaKnown RBP14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 CHKAP35790 457 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 SLC6A3Q01959 620 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 CYP4Z2PQ8N1L4 340 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TMEM161BQ8NDZ6 487 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 MRPS17Q9Y2R5 130 aaKnown RBP14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 CCDC154A6NI56 674 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 IRX1P78414 480 aaPredicted RBP14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 SPIDRQ14159 915 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 UXS1Q8NBZ7 420 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 KLHL1Q9NR64 748 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 CLDND1Q9NY35 253 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 CBWD6Q4V339 395 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TCHHL1Q5QJ38 904 aaPredicted RBP14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 KDM7AQ6ZMT4 941 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TMEM26Q6ZUK4 368 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 OR8H2Q8N162 312 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 PHACTR1Q9C0D0 580 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 LACRTQ9GZZ8 138 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 GANQ9H2C0 597 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 NOD2Q9HC29 1040 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 DUSP12Q9UNI6 340 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 TSC22D2O75157 780 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 ABL2P42684 1182 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 CRY1Q16526 586 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 CYP2A13Q16696 494 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 OTUD3Q5T2D3 398 aaPredicted RBP14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 METTL6Q8TCB7 284 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 FERD3LQ96RJ6 166 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 C2orf49Q9BVC5 232 aaPredicted RBP14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 MCM8Q9UJA3 840 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 HPSEQ9Y251 543 aa14.42□□□□□ -0.1
PCDHA11-201ENST00000398640 A0A087X0B3 334 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 ZSCAN5CA6NGD5 496 aaPredicted RBP14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 CES2O00748 559 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 FAM20BO75063 409 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 GLI1P08151 1106 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 SSTR1P30872 391 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 ABCG1P45844 678 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 GPR15P49685 360 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 ZNF268Q14587 947 aaPredicted RBP14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 TAF13Q15543 124 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 PLA2G4EQ3MJ16 856 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 FAAH2Q6GMR7 532 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 RNF44Q7L0R7 432 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 DEFB107AQ8IZN7 70 aa14.41□□□□□ -0.1
PCDHA11-201ENST00000398640 WDR36Q8NI36 951 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms