RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 LRRN4Q8WUT4 740 aa17.68■□□□□ 0.42
CSNK1D-204ENST00000398519 CASKIN2Q8WXE0 1202 aa17.68■□□□□ 0.42
CSNK1D-204ENST00000398519 OLFM3Q96PB7 478 aa17.68■□□□□ 0.42
CSNK1D-204ENST00000398519 MKRN2Q9H000 416 aaKnown RBP17.68■□□□□ 0.42
CSNK1D-204ENST00000398519 TNKS2Q9H2K2 1166 aa17.68■□□□□ 0.42
CSNK1D-204ENST00000398519 KCNK3O14649 394 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 APBB3O95704 486 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 GABRG2P18507 467 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 MX2P20592 715 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 PXNP49023 591 aaPredicted RBP17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 CSTF1Q05048 431 aaKnown RBP17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 DMWDQ09019 674 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 HS1BP3Q53T59 392 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 ANO7Q6IWH7 933 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 MDGA1Q8NFP4 955 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 HMGB4Q8WW32 186 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 HAUS1Q96CS2 278 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 HDAC11Q96DB2 347 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 SLC6A17Q9H1V8 727 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 CARD9Q9H257 536 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 FBXO4Q9UKT5 387 aa17.67■□□□□ 0.42
CSNK1D-204ENST00000398519 APOC4-APOC2K7ER74 178 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 APOC2P02655 101 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 NDUFV2P19404 249 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 HOXA6P31267 233 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 NR2C2P49116 596 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 CYTH1Q15438 398 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 METTL3Q86U44 580 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 RASSF3Q86WH2 238 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 PCDH20Q8N6Y1 951 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 OR2A12Q8NGT7 310 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 OR2T3Q8NH03 318 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 P3H4Q92791 437 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 ISG20Q96AZ6 181 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 ZNF599Q96NL3 588 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 TSGA13Q96PP4 275 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 LGMNQ99538 433 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 TM6SF2Q9BZW4 377 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 BNIP3LO60238 219 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 ALDH1A2O94788 518 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 TJP3O95049 919 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 ATP1A1P05023 1023 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 MSNP26038 577 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 PPIDQ08752 370 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 SLC10A7Q0GE19 358 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 KLF1Q13351 362 aaPredicted RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 ELAVL3Q14576 367 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 RFTN1Q14699 578 aaPredicted RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 PDK1Q15118 436 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 SEL1L2Q5TEA6 688 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 TMCO4Q5TGY1 634 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 STK40Q8N2I9 435 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 CCNYQ8ND76 341 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 ZNF419Q96HQ0 510 aaPredicted RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 MRGPRX1Q96LB2 322 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 FAM129BQ96TA1 746 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 RSPH9Q9H1X1 276 aaPredicted RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 LHX3Q9UBR4 397 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 EBF1Q9UH73 591 aa17.66■□□□□ 0.42
CSNK1D-204ENST00000398519 SHROOM3Q8TF72 1996 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 PPP1R12AO14974 1030 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 CCNCP24863 283 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 CXCR5P32302 372 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 RHOAP61586 193 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 GNG11P61952 73 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 LBRQ14739 615 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 CARD16Q5EG05 197 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 CCDC181Q5TID7 509 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 HEATR6Q6AI08 1181 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 TIGD7Q6NT04 549 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 DPY19L3Q6ZPD9 716 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 CACUL1Q86Y37 369 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 TMPRSS6Q8IU80 811 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 FATE1Q969F0 183 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 TRIM44Q96DX7 344 aaPredicted RBP17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 WDR24Q96S15 920 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 FBRSQ9HAH7 460 aa17.65■□□□□ 0.42
CSNK1D-204ENST00000398519 BCCIPQ9P287 314 aaKnown RBP eCLIP17.65■□□□□ 0.428e-7■■□□□ 14.4
CSNK1D-204ENST00000398519 TCRBV7S2A1N4TA0A589 114 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 MCF2LO15068 1137 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 MATN3O15232 486 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 GSRP00390 522 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 SP9P0CG40 484 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 C7P10643 843 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 ZNF528Q3MIS6 628 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 ATXN7L2Q5T6C5 722 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 B4GALNT4Q76KP1 1039 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 BZW1Q7L1Q6 419 aaKnown RBP17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 PLPP6Q8IY26 295 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 CCDC13Q8IYE1 715 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 TSEN2Q8NCE0 465 aaKnown RBP17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 CHST14Q8NCH0 376 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 OR2AP1Q8NGE2 309 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 MAML1Q92585 1016 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 NELL1Q92832 810 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 EXOC2Q96KP1 924 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 CCDC114Q96M63 670 aa17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 CINPQ9BW66 212 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-204ENST00000398519 TPSD1Q9BZJ3 242 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms