RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 CPXM2Q8N436 756 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 HJURPQ8NCD3 748 aaPredicted RBP19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 RBM15Q96T37 977 aaKnown RBP eCLIP19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 SENP1Q9P0U3 644 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 MTCH2Q9Y6C9 303 aa19.71■□□□□ 0.75
PDLIM2-204ENST00000397760 A0A0A0MRY4 1105 aa19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 TYW5A2RUC4 315 aaKnown RBP19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 IFNAR2P48551 515 aa19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 YBEYP58557 167 aaPredicted RBP19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 PPARDQ03181 441 aa19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 ZNF77Q15935 545 aa19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 SPRED3Q2MJR0 410 aa19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 PARP15Q460N3 678 aa19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 TDRD5Q8NAT2 981 aaKnown RBP19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 MAGEB18Q96M61 343 aa19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 SPATA13Q96N96 652 aa19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 CEP41Q9BYV8 373 aa19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 NKIRAS1Q9NYS0 192 aa19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 IPO11Q9UI26 975 aaKnown RBP19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 SHOC2Q9UQ13 582 aa19.7■□□□□ 0.74
PDLIM2-204ENST00000397760 MYO9BQ13459 2157 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 TCF3P15923 654 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 PTPN3P26045 913 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 BASP1P80723 227 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 PCGF5Q86SE9 256 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 ZNF354CQ86Y25 554 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 NPAS3Q8IXF0 933 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 PARP9Q8IXQ6 854 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 TACO1Q9BSH4 297 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 RAB6BQ9NRW1 208 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 CLEC1BQ9P126 229 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 MGRN1O60291 552 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 OPHN1O60890 802 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 WEE1P30291 646 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 USP4Q13107 963 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 SNCBQ16143 134 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 MPPE1Q53F39 396 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 RNASEH2BQ5TBB1 312 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 TIGD7Q6NT04 549 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 EP400NLQ6ZTU2 488 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 GET4Q7L5D6 327 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 PID1Q7Z2X4 250 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 SETD3Q86TU7 594 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 ZNF567Q8N184 647 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 CELF5Q8N6W0 485 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 DDI1Q8WTU0 396 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 MAML1Q92585 1016 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 FGF13Q92913 245 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 KCNK9Q9NPC2 374 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 HAUS2Q9NVX0 235 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 FETUBQ9UGM5 382 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 TBC1D30Q9Y2I9 924 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 ARL2BPQ9Y2Y0 163 aa19.69■□□□□ 0.74
PDLIM2-204ENST00000397760 TCP11X1B4DZS4 312 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 H0Y626 953 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 SMAPO00193 183 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 MATN3O15232 486 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 JCHAINP01591 159 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 RHOCP08134 193 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 ACVRL1P37023 503 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 GNA12Q03113 381 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 ZBTB17Q13105 803 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 SERINC3Q13530 473 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 ADGRE1Q14246 886 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 TEX44Q53QW1 395 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 ATAT1Q5SQI0 421 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 TPGS1Q6ZTW0 290 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 PPIL6Q8IXY8 311 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 CARNMT1Q8N4J0 409 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 OR52K2Q8NGK3 314 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 CPT1BQ92523 772 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 BHMTQ93088 406 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 MAGEH1Q9H213 219 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 KIF9Q9HAQ2 790 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 CLDND1Q9NY35 253 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 KLHL8Q9P2G9 620 aaPredicted RBP19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 TBC1D14Q9P2M4 693 aa19.68■□□□□ 0.74
PDLIM2-204ENST00000397760 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 A0A0D9SEW6 157 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 ILVBLA1L0T0 632 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 METTL18O95568 372 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 CCNB1P14635 433 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 IGFBP4P22692 258 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 STX2P32856 288 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 DLX2Q07687 328 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 CTC1Q2NKJ3 1217 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 FAXCQ5TGI0 409 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 CES5AQ6NT32 575 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 VAT1Q99536 393 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 S1PR5Q9H228 398 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 ETNK1Q9HBU6 452 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 GDE1Q9NZC3 331 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 TRHDEQ9UKU6 1024 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 FARP1Q9Y4F1 1045 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 J3KR12 359 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 ALOX15BO15296 676 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 PRPF4O43172 522 aaKnown RBP eCLIP19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 TBX10O75333 385 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 LUC7L3O95232 432 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms