RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CALR3Q96L12 384 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 KLC2Q9H0B6 622 aa25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 BTBD1Q9H0C5 482 aa25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 SP110Q9HB58 689 aa25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 UBA2Q9UBT2 640 aaPredicted RBP25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 HYOU1Q9Y4L1 999 aa25.85■■□□□ 1.73
TSPAN4-207ENST00000397411 BUB1BO60566 1050 aaPredicted RBP25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 EPN2O95208 641 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 CD48P09326 243 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 SERPINB6P35237 376 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 VAV2P52735 878 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 DPYSL3Q14195 570 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 USP30Q70CQ3 517 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 CYP2U1Q7Z449 544 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 TMEM139Q8IV31 216 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 RHOT1Q8IXI2 618 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 NETO2Q8NC67 525 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 OR2A12Q8NGT7 310 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 PIP4K2CQ8TBX8 421 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 TSC1Q92574 1164 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 ISG20Q96AZ6 181 aaKnown RBP25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 MAK16Q9BXY0 300 aaKnown RBP25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 DYRK4Q9NR20 520 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 ALG6Q9Y672 507 aa25.84■■□□□ 1.73
TSPAN4-207ENST00000397411 NYNRINQ9P2P1 1898 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 A0A1W2PP55 124 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 LRRD1A4D1F6 860 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 NRDCO43847 1150 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 IGLV3-19P01714 112 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 PRNPP04156 253 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 KDELR1P24390 212 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 SNRPD1P62314 119 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 SPEM2Q0P670 501 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 ANKRD20A8PQ5CZ79 823 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 SYCP2LQ5T4T6 812 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 LYSMD4Q5XG99 296 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 DPY19L3Q6ZPD9 716 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 RGL4Q8IZJ4 473 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 CHST14Q8NCH0 376 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 FAM71BQ8TC56 605 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 PIGKQ92643 395 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 FOXJ1Q92949 421 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 TM6SF2Q9BZW4 377 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 SGK2Q9HBY8 427 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 ETNK2Q9NVF9 386 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 DDX56Q9NY93 547 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 IL36AQ9UHA7 158 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 PPM1HQ9ULR3 514 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 REXO2Q9Y3B8 237 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 PCDHGA5Q9Y5G8 931 aa25.83■■□□□ 1.73
TSPAN4-207ENST00000397411 J3KR12 359 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 KPNA3O00505 521 aaPredicted RBP25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 TMCC1O94876 653 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 CD160O95971 181 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 KRT1P04264 644 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 ARSEP51690 589 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 RHOAP61586 193 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 ZNF33AQ06730 810 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 KIF5AQ12840 1032 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 POM121L1PQ3SYA9 428 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 INO80DQ53TQ3 878 aaPredicted RBP25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 ARSIQ5FYB1 569 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 LRRC38Q5VT99 294 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 DAAM2Q86T65 1068 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 GPR161Q8N6U8 529 aaKnown RBP25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 NPWQ8N729 165 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 CCDC112Q8NEF3 446 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 ANP32BQ92688 251 aaKnown RBP25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 HEPHQ9BQS7 1158 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 ZNF670Q9BS34 389 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 DESI2Q9BSY9 194 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 NEUROG2Q9H2A3 272 aa25.82■■□□□ 1.72
TSPAN4-207ENST00000397411 RCCD1A6NED2 376 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 FAM47DPA6NHR8 397 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 MEI4A8MW99 385 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 PRAMEF11O60813 436 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 SEMA4FO95754 770 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 IL4RP24394 825 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 ACSL1P33121 698 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 PTGER3P43115 390 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 RAD51Q06609 339 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 CCDC15Q0P6D6 951 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 IFI16Q16666 785 aaKnown RBP25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 AFMIDQ63HM1 303 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 ARHGAP12Q8IWW6 846 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 TMIEQ8NEW7 156 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 TPCN2Q8NHX9 752 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 GRIN3AQ8TCU5 1115 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 RAPGEF5Q92565 580 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 HSPA12BQ96MM6 686 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 ZDHHC6Q9H6R6 413 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 IPO11Q9UI26 975 aaKnown RBP25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 MFHAS1Q9Y4C4 1052 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 DUSP10Q9Y6W6 482 aa25.81■■□□□ 1.72
TSPAN4-207ENST00000397411 BCLAF3A2AJT9 711 aaKnown RBP25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 PALMO75781 387 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 IGSF6O95976 241 aa25.8■■□□□ 1.72
TSPAN4-207ENST00000397411 GSRP00390 522 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms