RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 DNAJC28Q9NX36 388 aa16.83■□□□□ 0.28
TRIM39-205ENST00000396551 PCDHB12Q9Y5F1 795 aa16.83■□□□□ 0.28
TRIM39-205ENST00000396551 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.83■□□□□ 0.28
TRIM39-205ENST00000396551 SPECC1L-ADORA2AF8WAN1 911 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 ARNTP27540 789 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 PAPOLAP51003 745 aaKnown RBP16.82■□□□□ 0.28
TRIM39-205ENST00000396551 RTL3Q8N8U3 475 aaKnown RBP16.82■□□□□ 0.28
TRIM39-205ENST00000396551 GIMAP7Q8NHV1 300 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 N4BP2L2Q92802 583 aaPredicted RBP16.82■□□□□ 0.28
TRIM39-205ENST00000396551 TLL2Q9Y6L7 1015 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 MIA3Q5JRA6 1907 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 ARHGEF37A1IGU5 675 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 ANXA9O76027 345 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 AOC1P19801 751 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 ELF1P32519 619 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 TBCCQ15814 346 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 DDR2Q16832 855 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 ESRP1Q6NXG1 681 aaKnown RBP16.82■□□□□ 0.28
TRIM39-205ENST00000396551 TMEM151AQ8N4L1 468 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 RHOJQ9H4E5 214 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 NMRAL1Q9HBL8 299 aa16.82■□□□□ 0.28
TRIM39-205ENST00000396551 RBM22Q9NW64 420 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRIM39-205ENST00000396551 MAGEC1O60732 1142 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 KRT36O76013 467 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 AHSGP02765 367 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 SBK3P0C264 359 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 CKBP12277 381 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 RAP1GDS1P52306 607 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 ANO4Q32M45 955 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 GLB1LQ6UWU2 654 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 DENND6AQ8IWF6 608 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 COLGALT2Q8IYK4 626 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 ZNF781Q8N8C0 355 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 DNAJB4Q9UDY4 337 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 SLC2A6Q9UGQ3 507 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 SQORQ9Y6N5 450 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 PHGDHO43175 533 aaKnown RBP16.81■□□□□ 0.28
TRIM39-205ENST00000396551 OAZ2O95190 189 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 ARCN1P48444 511 aaKnown RBP16.81■□□□□ 0.28
TRIM39-205ENST00000396551 MLLT6P55198 1093 aaPredicted RBP16.81■□□□□ 0.28
TRIM39-205ENST00000396551 USP46P62068 366 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 USP4Q13107 963 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 MOCOSQ96EN8 888 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 SLC39A13Q96H72 371 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 MRGPRX2Q96LB1 330 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 SERPINB11Q96P15 392 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 CPSF2Q9P2I0 782 aaKnown RBP16.81■□□□□ 0.28
TRIM39-205ENST00000396551 SORCS3Q9UPU3 1222 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 APOBEC2Q9Y235 224 aaKnown RBP16.81■□□□□ 0.28
TRIM39-205ENST00000396551 SIN3BO75182 1162 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 LMNAP02545 664 aaKnown RBP16.81■□□□□ 0.28
TRIM39-205ENST00000396551 GRK4P32298 578 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 GEMP55040 296 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 MPP1Q00013 466 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 NRG1Q02297 640 aaPredicted RBP16.81■□□□□ 0.28
TRIM39-205ENST00000396551 MFSD6LQ8IWD5 586 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 CNTN4Q8IWV2 1026 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 PCSK9Q8NBP7 692 aaKnown RBP16.81■□□□□ 0.28
TRIM39-205ENST00000396551 CLPTM1LQ96KA5 538 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 FTHL17Q9BXU8 183 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 ATXN3LQ9H3M9 355 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 SCML2Q9UQR0 700 aa16.81■□□□□ 0.28
TRIM39-205ENST00000396551 PMPCBO75439 489 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 VAPBO95292 243 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 SAT1P21673 171 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 CPOXP36551 454 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 CHRNA4P43681 627 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 OR1G1P47890 313 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 PTDSS1P48651 473 aaKnown RBP16.8■□□□□ 0.28
TRIM39-205ENST00000396551 ZNF683Q8IZ20 524 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 RSRC1Q96IZ7 334 aaKnown RBP16.8■□□□□ 0.28
TRIM39-205ENST00000396551 FAM161BQ96MY7 647 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 LBHD1Q9BQE6 289 aaPredicted RBP16.8■□□□□ 0.28
TRIM39-205ENST00000396551 GATA5Q9BWX5 397 aaPredicted RBP16.8■□□□□ 0.28
TRIM39-205ENST00000396551 TRPV6Q9H1D0 765 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 RNF186Q9NXI6 227 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 NSMCE4AQ9NXX6 385 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 PRG3Q9Y2Y8 225 aaPredicted RBP16.8■□□□□ 0.28
TRIM39-205ENST00000396551 TCAF1Q9Y4C2 921 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 MEI4A8MW99 385 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 TK2O00142 265 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 PEX11BO96011 259 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 AVPR1AP37288 418 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 CTBP1Q13363 440 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 NOMO2Q5JPE7 1267 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 KDELC2Q7Z4H8 507 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 SLC41A1Q8IVJ1 513 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 TTC9BQ8N6N2 239 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 ACSS2Q9NR19 701 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 TBC1D13Q9NVG8 400 aa16.8■□□□□ 0.28
TRIM39-205ENST00000396551 WASH4PA8MWX3 477 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 TMEM189-UBE2V1I3L0A0 370 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 EOMESO95936 686 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 SLC35E2BP0CK96 405 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 ACLYP53396 1101 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 USP10Q14694 798 aaKnown RBP16.79■□□□□ 0.28
TRIM39-205ENST00000396551 RCN1Q15293 331 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 TIGD7Q6NT04 549 aaPredicted RBP16.79■□□□□ 0.28
TRIM39-205ENST00000396551 MSANTD2Q6P1R3 559 aa16.79■□□□□ 0.28
TRIM39-205ENST00000396551 RAPH1Q70E73 1250 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms