RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ROPN1Q9HAT0 212 aaPredicted RBP12.94□□□□□ -0.34
TRIM39-204ENST00000396548 SP110Q9HB58 689 aa12.94□□□□□ -0.34
TRIM39-204ENST00000396548 E7EVH7 732 aa12.94□□□□□ -0.34
TRIM39-204ENST00000396548 OPA1O60313 960 aa12.94□□□□□ -0.34
TRIM39-204ENST00000396548 MZF1P28698 734 aaPredicted RBP12.94□□□□□ -0.34
TRIM39-204ENST00000396548 OAS2P29728 719 aaKnown RBP12.94□□□□□ -0.34
TRIM39-204ENST00000396548 TCEAL5Q5H9L2 206 aa12.94□□□□□ -0.34
TRIM39-204ENST00000396548 TMCO4Q5TGY1 634 aa12.94□□□□□ -0.34
TRIM39-204ENST00000396548 STEAP4Q687X5 459 aa12.94□□□□□ -0.34
TRIM39-204ENST00000396548 ANKRD54Q6NXT1 300 aa12.94□□□□□ -0.34
TRIM39-204ENST00000396548 PYROXD1Q8WU10 500 aa12.94□□□□□ -0.34
TRIM39-204ENST00000396548 ING5Q8WYH8 240 aa12.94□□□□□ -0.34
TRIM39-204ENST00000396548 NSUN3Q9H649 340 aaKnown RBP12.94□□□□□ -0.34
TRIM39-204ENST00000396548 MT-CYBP00156 380 aaPredicted RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 CBX2Q14781 532 aaPredicted RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 CYTH1Q15438 398 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 DNAJC21Q5F1R6 531 aaKnown RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 ARID3BQ8IVW6 561 aaPredicted RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 FIBINQ8TAL6 211 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 UHMK1Q8TAS1 419 aaKnown RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 MRGPRX2Q96LB1 330 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 EBNA1BP2Q99848 306 aaKnown RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 DHRS4Q9BTZ2 278 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 LRRC40Q9H9A6 602 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 CHMP2BQ9UQN3 213 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 AAR2Q9Y312 384 aaKnown RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 MRPS23Q9Y3D9 190 aaKnown RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 A0A087WUV0 522 aaPredicted RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 GOLGA8KD6RF30 607 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 PSMD3O43242 534 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 SSTR1P30872 391 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 PLK1P53350 603 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 SKOR1P84550 965 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 MSLNQ13421 630 aaPredicted RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 ADAM15Q13444 863 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 RFTN1Q14699 578 aaPredicted RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 NPAS3Q8IXF0 933 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 CARNMT1Q8N4J0 409 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 EPS8L3Q8TE67 593 aaKnown RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 PPP1R2P1Q96PQ5 205 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 MGME1Q9BQP7 344 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 TRPV4Q9HBA0 871 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 CLEC1BQ9P126 229 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 KIAA1549LQ6ZVL6 1849 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 RNF40O75150 1001 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 GJB3O75712 270 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 CR2P20023 1033 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 SARNPP82979 210 aaKnown RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 COL19A1Q14993 1142 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 RANBP10Q6VN20 620 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 ADGRG2Q8IZP9 1017 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 ATP11CQ8NB49 1132 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 OR52K1Q8NGK4 314 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 TLCD1Q96CP7 247 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 PABPC5Q96DU9 382 aaKnown RBP12.93□□□□□ -0.34
TRIM39-204ENST00000396548 PGM2Q96G03 612 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 S1PR5Q9H228 398 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 LINC00597Q9H2U6 94 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 NT5MQ9NPB1 228 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 UBP1Q9NZI7 540 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 MARK1Q9P0L2 795 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 FETUBQ9UGM5 382 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 TTLL3Q9Y4R7 772 aa12.93□□□□□ -0.34
TRIM39-204ENST00000396548 CXorf51AA0A1B0GTR3 108 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 H0Y626 953 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 ANXA9O76027 345 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 FCARP24071 287 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 CSKP41240 450 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 OXCT1P55809 520 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 STAT4Q14765 748 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 LEKR1Q6ZMV7 388 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 TMEM25Q86YD3 366 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 PSKH2Q96QS6 385 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 LMCD1Q9NZU5 365 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 CDH22Q9UJ99 828 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 SDR42E2A6NKP2 422 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 ALDH1A2O94788 518 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 GSTA2P09210 222 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 ETFBP38117 255 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 GPS2Q13227 327 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 MPP3Q13368 585 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 PRPSAP1Q14558 356 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 SLC14A2Q15849 920 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 RARS2Q5T160 578 aaKnown RBP12.92□□□□□ -0.34
TRIM39-204ENST00000396548 AGBL2Q5U5Z8 902 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 IL31Q6EBC2 164 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
TRIM39-204ENST00000396548 UNC5AQ6ZN44 842 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 C3orf62Q6ZUJ4 267 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 CYS1Q717R9 158 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 KIAA0907Q7Z7F0 614 aaPredicted RBP12.92□□□□□ -0.34
TRIM39-204ENST00000396548 TDRPQ86YL5 185 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 CCDC117Q8IWD4 279 aaPredicted RBP12.92□□□□□ -0.34
TRIM39-204ENST00000396548 APCDD1Q8J025 514 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 ATP6V1G3Q96LB4 118 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 ASB16Q96NS5 453 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 TRIM56Q9BRZ2 755 aaKnown RBP12.92□□□□□ -0.34
TRIM39-204ENST00000396548 IGFLR1Q9H665 355 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 ACSS3Q9H6R3 686 aa12.92□□□□□ -0.34
TRIM39-204ENST00000396548 KIF9Q9HAQ2 790 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms