RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 LTBP2Q14767 1821 aa15.2■□□□□ 0.02
CBX3-202ENST00000396386 A0A0G2JND7 137 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 PLIN3O60664 434 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 PMPCBO75439 489 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 ATP5HO75947 161 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 PEX11BO96011 259 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 HSPA8P11142 646 aaKnown RBP15.19■□□□□ 0.02
CBX3-202ENST00000396386 CCL5P13501 91 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 ARFIP2P53365 341 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 USP41Q3LFD5 358 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 DENND5AQ6IQ26 1287 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 SLC8B1Q6J4K2 584 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 POTEHQ6S545 545 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 DEFB128Q7Z7B8 93 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 NSMCE1Q8WV22 266 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 IGSF8Q969P0 613 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 KLHL29Q96CT2 875 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 ATXN7L3BQ96GX2 97 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 RPRD1AQ96P16 312 aaPredicted RBP15.19■□□□□ 0.02
CBX3-202ENST00000396386 TMEM120AQ9BXJ8 343 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 SLC25A51Q9H1U9 297 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 CCSER2Q9H7U1 834 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 MTO1Q9Y2Z2 717 aaKnown RBP15.19■□□□□ 0.02
CBX3-202ENST00000396386 HBS1LQ9Y450 684 aaKnown RBP15.19■□□□□ 0.02
CBX3-202ENST00000396386 TCAF1Q9Y4C2 921 aa15.19■□□□□ 0.02
CBX3-202ENST00000396386 DRGXA6NNA5 263 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 UNC5CO95185 931 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 MPOP05164 745 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 ALDH7A1P49419 539 aaKnown RBP15.18■□□□□ 0.02
CBX3-202ENST00000396386 LBX1P52954 281 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 OCRLQ01968 901 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 POU6F1Q14863 301 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 CYB5D1Q6P9G0 228 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 ZNF354CQ86Y25 554 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 PDZD8Q8NEN9 1154 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 PPP1R14CQ8TAE6 165 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 MRGPRX2Q96LB1 330 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 RNF208Q9H0X6 261 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 NT5MQ9NPB1 228 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 ZFP69BQ9UJL9 534 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 BACE2Q9Y5Z0 518 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 CCDC78A2IDD5 438 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 ADAM12O43184 909 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 RAMP2O60895 175 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 EFEMP2O95967 443 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 PROCP04070 461 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 NQO1P15559 274 aaKnown RBP15.18■□□□□ 0.02
CBX3-202ENST00000396386 HADHAP40939 763 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 MAPKAPK2P49137 400 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 TUFMP49411 452 aaKnown RBP15.18■□□□□ 0.02
CBX3-202ENST00000396386 IRX4P78413 519 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 PARP15Q460N3 678 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 FASTKD1Q53R41 847 aaKnown RBP15.18■□□□□ 0.02
CBX3-202ENST00000396386 MARC1Q5VT66 337 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 ARMC3Q5W041 872 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 FSTL4Q6MZW2 842 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 C16orf46Q6P387 395 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 KDELC1Q6UW63 502 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 SLC39A5Q6ZMH5 540 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 CMC1Q7Z7K0 106 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 TBC1D1Q86TI0 1168 aaPredicted RBP15.18■□□□□ 0.02
CBX3-202ENST00000396386 OVCA2Q8WZ82 227 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 AZIN2Q96A70 460 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 PABPC5Q96DU9 382 aaKnown RBP15.18■□□□□ 0.02
CBX3-202ENST00000396386 IMP4Q96G21 291 aaKnown RBP15.18■□□□□ 0.02
CBX3-202ENST00000396386 VPS39Q96JC1 886 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 MCMBPQ9BTE3 642 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 KLC4Q9NSK0 619 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 ZNF212Q9UDV6 495 aa15.18■□□□□ 0.02
CBX3-202ENST00000396386 F5H5T6 163 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 J3KR12 359 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 SNNO75324 88 aaPredicted RBP15.17■□□□□ 0.02
CBX3-202ENST00000396386 UPP2O95045 317 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 DLDP09622 509 aaKnown RBP15.17■□□□□ 0.02
CBX3-202ENST00000396386 PAMP19021 973 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 TACR2P21452 398 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 WNT3AP56704 352 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 IL10RBQ08334 325 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 STX3Q13277 289 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 CCDC153Q494R4 210 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 TRIM60Q495X7 471 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 NADSYN1Q6IA69 706 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.17■□□□□ 0.022e-6■□□□□ 8.7
CBX3-202ENST00000396386 CIR1Q86X95 450 aaPredicted RBP15.17■□□□□ 0.02
CBX3-202ENST00000396386 CRLF3Q8IUI8 442 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 RNF168Q8IYW5 571 aaPredicted RBP15.17■□□□□ 0.02
CBX3-202ENST00000396386 ZNF778Q96MU6 729 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 PRKD2Q9BZL6 878 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 CWH43Q9H720 699 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 VPS45Q9NRW7 570 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 DNMT3LQ9UJW3 386 aa15.17■□□□□ 0.02
CBX3-202ENST00000396386 RPL17P18621 184 aaKnown RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 HNRNPH1P31943 449 aaKnown RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 OR1D2P34982 312 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 YBEYP58557 167 aaPredicted RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 ELF3P78545 371 aaPredicted RBP15.16■□□□□ 0.02
CBX3-202ENST00000396386 CDK18Q07002 472 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 TNK2Q07912 1038 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 SEPT6Q14141 434 aa15.16■□□□□ 0.02
CBX3-202ENST00000396386 PCLAFQ15004 111 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms