RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 KLHL17Q6TDP4 642 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 FBXO11Q86XK2 927 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 KRT73Q86Y46 540 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 CDAN1Q8IWY9 1227 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 PRELID2Q8N945 189 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 MAGEE2Q8TD90 523 aaPredicted RBP8.55□□□□□ -1.04
NDE1-202ENST00000396355 PCNPQ8WW12 178 aaKnown RBP8.55□□□□□ -1.04
NDE1-202ENST00000396355 PROX1Q92786 737 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 PBXIP1Q96AQ6 731 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 ACSF2Q96CM8 615 aaPredicted RBP8.55□□□□□ -1.04
NDE1-202ENST00000396355 ZNF512Q96ME7 567 aaPredicted RBP8.55□□□□□ -1.04
NDE1-202ENST00000396355 PAFAH2Q99487 392 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 HSD17B14Q9BPX1 270 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 NEURL2Q9BR09 285 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 SH2D3AQ9BRG2 576 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 RHOBTB2Q9BYZ6 727 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 PCIF1Q9H4Z3 704 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 CHST7Q9NS84 486 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 IGSF9Q9P2J2 1179 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 SRRDQ9UH36 339 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 POMPQ9Y244 141 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 IFT52Q9Y366 437 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 TCRBV7S2A1N4TA0A589 114 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 ARHGEF35A5YM69 484 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 TBX3O15119 743 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 KMOO15229 486 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 KRT1P04264 644 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 WEE2P0C1S8 567 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 MSH3P20585 1137 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 OSBPP22059 807 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 RRM1P23921 792 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 ATP5OP48047 213 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 PRMT2P55345 433 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 BST1Q10588 318 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 DCAF12L1Q5VU92 463 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 DSG4Q86SJ6 1040 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 MED30Q96HR3 178 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 HGH1Q9BTY7 390 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 TRIT1Q9H3H1 467 aaKnown RBP8.55□□□□□ -1.04
NDE1-202ENST00000396355 PRDM5Q9NQX1 630 aaPredicted RBP8.55□□□□□ -1.04
NDE1-202ENST00000396355 HMGXB4Q9UGU5 601 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 COMMD10Q9Y6G5 202 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 LOC100506127A0A0U1RQW1 187 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 BUD23O43709 281 aaKnown RBP8.55□□□□□ -1.04
NDE1-202ENST00000396355 LZTS3O60299 673 aaPredicted RBP8.55□□□□□ -1.04
NDE1-202ENST00000396355 SLITRK3O94933 977 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 PTPN9P43378 593 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 CENPAP49450 140 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 KLHL38Q2WGJ6 581 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 KCTD8Q6ZWB6 473 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 GMCL1P1Q8NEA9 526 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 GRIN3AQ8TCU5 1115 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 ALG3Q92685 438 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 GMCL1Q96IK5 515 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 NAP1L4Q99733 375 aaKnown RBP8.55□□□□□ -1.04
NDE1-202ENST00000396355 SYT11Q9BT88 431 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 TEX13BQ9BXU2 312 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 ROGDIQ9GZN7 287 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 COQ10BQ9H8M1 238 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 FANCEQ9HB96 536 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 DNAJC11Q9NVH1 559 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 PSMD13Q9UNM6 376 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 STXBP5LQ9Y2K9 1186 aa8.55□□□□□ -1.04
NDE1-202ENST00000396355 MT-ND1P03886 318 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 UBL4AP11441 157 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 PSKH1P11801 424 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 AZGP1P25311 298 aaKnown RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 NME5P56597 212 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 CAV1Q03135 178 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 YWHAHQ04917 246 aaPredicted RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 PRKCZQ05513 592 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 SPP2Q13103 211 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 TOP3AQ13472 1001 aaPredicted RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 TAB1Q15750 504 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 FAM47CQ5HY64 1035 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 RBM20Q5T481 1227 aaKnown RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 TMEM179Q6ZVK1 233 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 C1orf186Q6ZWK4 172 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 SLFN11Q7Z7L1 901 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 METTL25Q8N6Q8 603 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 OR8K3Q8NH51 312 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 VANGL1Q8TAA9 524 aaPredicted RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 POMGNT1Q8WZA1 660 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 MAP6Q96JE9 813 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 MAGED4Q96JG8 741 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 BTBD9Q96Q07 612 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 PTPN18Q99952 460 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 CHMP1AQ9HD42 196 aaPredicted RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 CCDC59Q9P031 241 aaKnown RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 VANGL2Q9ULK5 521 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 PRR12Q9ULL5 1215 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 PRKAB1Q9Y478 270 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 A0A1B0GTW7 788 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 TMX2-CTNND1H3BSU7 103 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 NRP2O60462 931 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 ATN1P54259 1190 aaPredicted RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 DBPQ10586 325 aaPredicted RBP8.54□□□□□ -1.04
NDE1-202ENST00000396355 EPC2Q52LR7 807 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 C16orf46Q6P387 395 aa8.54□□□□□ -1.04
NDE1-202ENST00000396355 ARCQ7LC44 396 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms