RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 TANKQ92844 425 aa9.22□□□□□ -0.93
RAE1-202ENST00000395840 MED30Q96HR3 178 aa9.22□□□□□ -0.93
RAE1-202ENST00000395840 COG8Q96MW5 612 aa9.22□□□□□ -0.93
RAE1-202ENST00000395840 FIZ1Q96SL8 496 aa9.22□□□□□ -0.93
RAE1-202ENST00000395840 AGPAT1Q99943 283 aa9.22□□□□□ -0.93
RAE1-202ENST00000395840 EBF4Q9BQW3 602 aa9.22□□□□□ -0.93
RAE1-202ENST00000395840 KIFC3Q9BVG8 833 aa9.22□□□□□ -0.93
RAE1-202ENST00000395840 RPF2Q9H7B2 306 aaKnown RBP9.22□□□□□ -0.93
RAE1-202ENST00000395840 GPSM3Q9Y4H4 160 aa9.22□□□□□ -0.93
RAE1-202ENST00000395840 PCDHGA11Q9Y5H2 935 aa9.22□□□□□ -0.93
RAE1-202ENST00000395840 ZNF701M0R085 212 aaPredicted RBP9.21□□□□□ -0.93
RAE1-202ENST00000395840 BANF1O75531 89 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 GARTP22102 1010 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 PROZP22891 400 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 GABRB3P28472 473 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 NMT1P30419 496 aaKnown RBP9.21□□□□□ -0.93
RAE1-202ENST00000395840 CLK3P49761 638 aaKnown RBP9.21□□□□□ -0.93
RAE1-202ENST00000395840 CASP5P51878 434 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 PEX6Q13608 980 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 LSM12Q3MHD2 195 aaKnown RBP9.21□□□□□ -0.93
RAE1-202ENST00000395840 ZBED5Q49AG3 693 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 CCDC58Q4VC31 144 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 EFHC2Q5JST6 749 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 FAM109BQ6ICB4 259 aaPredicted RBP9.21□□□□□ -0.93
RAE1-202ENST00000395840 C4orf22Q6V702 233 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 GSTA5Q7RTV2 222 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 LYSMD3Q7Z3D4 306 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 ZNF598Q86UK7 904 aaKnown RBP9.21□□□□□ -0.93
RAE1-202ENST00000395840 IGFN1Q86VF2 1251 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 CRIPAKQ8N1N5 446 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 CCDC33Q8N5R6 958 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 MZB1Q8WU39 189 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 LINC01599Q8WXQ3 324 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 ALKBH8Q96BT7 664 aaKnown RBP9.21□□□□□ -0.93
RAE1-202ENST00000395840 RMND5BQ96G75 393 aaPredicted RBP9.21□□□□□ -0.93
RAE1-202ENST00000395840 CPB2Q96IY4 423 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 PSD2Q9BQI7 771 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 HEMGNQ9BXL5 484 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 PTPRHQ9HD43 1115 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 RIMS3Q9UJD0 308 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 PACSIN3Q9UKS6 424 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 SATB2Q9UPW6 733 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 DNAJC16Q9Y2G8 782 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 CPQQ9Y646 472 aa9.21□□□□□ -0.93
RAE1-202ENST00000395840 C1orf232A0A0U1RR37 186 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 INPPL1O15357 1258 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 CLOCKO15516 846 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 BMP10O95393 424 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 GRM5P41594 1212 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 DEFB103AP81534 67 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 MRPS22P82650 360 aaKnown RBP9.21□□□□□ -0.94
RAE1-202ENST00000395840 OTUD4Q01804 1114 aaKnown RBP9.21□□□□□ -0.94
RAE1-202ENST00000395840 BST1Q10588 318 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 NRF1Q16656 503 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 TCTN1Q2MV58 587 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 AARS2Q5JTZ9 985 aaKnown RBP9.21□□□□□ -0.94
RAE1-202ENST00000395840 UBXN11Q5T124 520 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 ANKRD26P1Q6NSI1 321 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 LILRA2Q8N149 483 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 ZNF564Q8TBZ8 553 aaPredicted RBP9.21□□□□□ -0.94
RAE1-202ENST00000395840 SP7Q8TDD2 431 aaPredicted RBP9.21□□□□□ -0.94
RAE1-202ENST00000395840 PAFAH2Q99487 392 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 MECRQ9BV79 373 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 TARS2Q9BW92 718 aaKnown RBP9.21□□□□□ -0.94
RAE1-202ENST00000395840 FOXP3Q9BZS1 431 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 PLEKHA5Q9HAU0 1116 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 PCDH12Q9NPG4 1184 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 HACD3Q9P035 362 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 TBC1D14Q9P2M4 693 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 IPPQ9Y573 584 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 STYXL1Q9Y6J8 313 aa9.21□□□□□ -0.94
RAE1-202ENST00000395840 ARHGEF37A1IGU5 675 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 SDR42E2A6NKP2 422 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 B4GALT5O43286 388 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 CLASP2O75122 1294 aaKnown RBP9.2□□□□□ -0.94
RAE1-202ENST00000395840 CRYZL1O95825 349 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 MT-ND3P03897 115 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 FYNP06241 537 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 C8BP07358 591 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 ITGAXP20702 1163 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 RPL10P27635 214 aaKnown RBP9.2□□□□□ -0.94
RAE1-202ENST00000395840 NKX2-5P52952 324 aaPredicted RBP9.2□□□□□ -0.94
RAE1-202ENST00000395840 TMPRSS15P98073 1019 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 KRT80Q6KB66 452 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 ADGRD1Q6QNK2 874 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 TAS1R3Q7RTX0 852 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 FIBCD1Q8N539 461 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 TMEM174Q8WUU8 243 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 ZNF689Q96CS4 500 aaPredicted RBP9.2□□□□□ -0.94
RAE1-202ENST00000395840 RSAD1Q9HA92 442 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 PPCSQ9HAB8 311 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 OLAHQ9NV23 265 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
RAE1-202ENST00000395840 CNTN3Q9P232 1028 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 CRNNQ9UBG3 495 aaPredicted RBP9.2□□□□□ -0.94
RAE1-202ENST00000395840 B3GNT3Q9Y2A9 372 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 PCDHGA8Q9Y5G5 932 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 CCDC195A0A1B0GUA6 201 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 KLF11O14901 512 aa9.2□□□□□ -0.94
RAE1-202ENST00000395840 OGTO15294 1046 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms