RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 CPT1BQ92523 772 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 LRRC3BQ96PB8 259 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 FCRL5Q96RD9 977 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 CINPQ9BW66 212 aaPredicted RBP13.94□□□□□ -0.18
VAPB-202ENST00000395802 ECT2Q9H8V3 914 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 VIPAS39Q9H9C1 493 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 PDFQ9HBH1 243 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 ETNK1Q9HBU6 452 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 VPS45Q9NRW7 570 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 TTLL3Q9Y4R7 772 aa13.94□□□□□ -0.18
VAPB-202ENST00000395802 ZBTB24O43167 697 aaPredicted RBP13.93□□□□□ -0.18
VAPB-202ENST00000395802 PEX11BO96011 259 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 CYP17A1P05093 508 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 LMAN2Q12907 356 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 PUS10Q3MIT2 529 aaKnown RBP13.93□□□□□ -0.18
VAPB-202ENST00000395802 ZDHHC24Q6UX98 284 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 PDIK1LQ8N165 341 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 MREGQ8N565 214 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 NAT8LQ8N9F0 302 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 MCUQ8NE86 351 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 WFIKKN2Q8TEU8 576 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 RSPRY1Q96DX4 576 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 PSKH2Q96QS6 385 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 EBF3Q9H4W6 596 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 GGA2Q9UJY4 613 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 OR51B4Q9Y5P0 310 aa13.93□□□□□ -0.18
VAPB-202ENST00000395802 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.92□□□□□ -0.18
VAPB-202ENST00000395802 TP73O15350 636 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 PPFIA2O75334 1257 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 METTL18O95568 372 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 PABPC1P11940 636 aaKnown RBP13.92□□□□□ -0.18
VAPB-202ENST00000395802 MZF1P28698 734 aaPredicted RBP13.92□□□□□ -0.18
VAPB-202ENST00000395802 HLA-FP30511 346 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 DGKGP49619 791 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 NRLP54845 237 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 ARL4CP56559 192 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 ITKQ08881 620 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 SLC10A7Q0GE19 358 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 RUNX3Q13761 415 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 KCNJ11Q14654 390 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 E2F5Q15329 346 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 CCDC85BQ15834 202 aaPredicted RBP13.92□□□□□ -0.18
VAPB-202ENST00000395802 RALGPS1Q5JS13 557 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 CENPUQ71F23 418 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 LINC00523Q86TU6 105 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.92□□□□□ -0.18
VAPB-202ENST00000395802 OR52K2Q8NGK3 314 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 USP33Q8TEY7 942 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 PRCCQ92733 491 aaPredicted RBP13.92□□□□□ -0.18
VAPB-202ENST00000395802 CEP41Q9BYV8 373 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 SLC25A51Q9H1U9 297 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 GLOD4Q9HC38 313 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 XAB2Q9HCS7 855 aaKnown RBP13.92□□□□□ -0.18
VAPB-202ENST00000395802 ABCB8Q9NUT2 735 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 SLC25A13Q9UJS0 675 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 FBXO10Q9UK96 956 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 SLC8A2Q9UPR5 921 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 ATP8A1Q9Y2Q0 1164 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 CHD5Q8TDI0 1954 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 ANHXE9PGG2 379 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 EIF3HO15372 352 aaKnown RBP eCLIP13.92□□□□□ -0.18
VAPB-202ENST00000395802 MBTPS2O43462 519 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 PSMB4P28070 264 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 NNMTP40261 264 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 EIF2DP41214 584 aaKnown RBP13.92□□□□□ -0.18
VAPB-202ENST00000395802 GEMP55040 296 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 NSUN2Q08J23 767 aaKnown RBP eCLIP13.92□□□□□ -0.18
VAPB-202ENST00000395802 MPP3Q13368 585 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 HIF1AQ16665 826 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 PITRM1Q5JRX3 1037 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 TRIM68Q6AZZ1 485 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 NAPEPLDQ6IQ20 393 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 PARM1Q6UWI2 310 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 CNTD1Q8N815 330 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 FGF14Q92915 247 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 ALG14Q96F25 216 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 PHF7Q9BWX1 381 aaPredicted RBP13.92□□□□□ -0.18
VAPB-202ENST00000395802 LRRC40Q9H9A6 602 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 NT5MQ9NPB1 228 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 DNAJC17Q9NVM6 304 aaKnown RBP13.92□□□□□ -0.18
VAPB-202ENST00000395802 DEC1Q9P2X7 70 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 VPS51Q9UID3 782 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 SLC27A6Q9Y2P4 619 aa13.92□□□□□ -0.18
VAPB-202ENST00000395802 DENND4AQ7Z401 1863 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 TIMM44O43615 452 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 ZMPSTE24O75844 475 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 AP2A1O95782 977 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 HLA-DQB2P05538 268 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 ATP5BP06576 529 aaKnown RBP13.91□□□□□ -0.18
VAPB-202ENST00000395802 MLNP12872 115 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 POLR2EP19388 210 aaKnown RBP13.91□□□□□ -0.18
VAPB-202ENST00000395802 NFKB1P19838 968 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 GDI1P31150 447 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 CD70P32970 193 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 MAPK8P45983 427 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 ARF5P84085 180 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 SPDYCQ5MJ68 293 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 TSEN2Q8NCE0 465 aaKnown RBP13.91□□□□□ -0.18
VAPB-202ENST00000395802 WFDC5Q8TCV5 224 aa13.91□□□□□ -0.18
VAPB-202ENST00000395802 KXD1Q9BQD3 176 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms