RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 TBK1Q9UHD2 729 aa15.42■□□□□ 0.06
SCAF11-204ENST00000395454 HBS1LQ9Y450 684 aaKnown RBP15.42■□□□□ 0.06
SCAF11-204ENST00000395454 NUP210Q8TEM1 1887 aaPredicted RBP15.42■□□□□ 0.06
SCAF11-204ENST00000395454 HELZP42694 1942 aaKnown RBP15.42■□□□□ 0.06
SCAF11-204ENST00000395454 ERI2A8K979 691 aaKnown RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 POC1B-GALNT4F8VUJ3 575 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 SCAMP3O14828 347 aaKnown RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 CACNG3O60359 315 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 MOCS2O96007 188 aaPredicted RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 IGLV3-27P01718 113 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 LAMP2P13473 410 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 KCNQ1P51787 676 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 TRIP4Q15650 581 aaPredicted RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 ACBD5Q5T8D3 534 aaPredicted RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 FOXR1Q6PIV2 292 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 ARHGAP12Q8IWW6 846 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 SRRM1Q8IYB3 904 aaKnown RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 ZNF683Q8IZ20 524 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 CCNYQ8ND76 341 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 SH3RF2Q8TEC5 729 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 ZNF473Q8WTR7 871 aaKnown RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 TBC1D31Q96DN5 1066 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 GORASP1Q9BQQ3 440 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 ZC3H7BQ9UGR2 993 aaKnown RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 ZNF180Q9UJW8 692 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 GGA2Q9UJY4 613 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 SMG5Q9UPR3 1016 aaKnown RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 ZFP37Q9Y6Q3 630 aaPredicted RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 TRIOO75962 3097 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 NYNRINQ9P2P1 1898 aaKnown RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 LEFTY2O00292 366 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 STC2O76061 302 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 VIPR2P41587 438 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 HARS2P49590 506 aaKnown RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 MLLT6P55198 1093 aaPredicted RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 EFTUD2Q15029 972 aaKnown RBP eCLIP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 NUGGCQ68CJ6 796 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 KCTD11Q693B1 232 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 CAPN12Q6ZSI9 719 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 CCNJLQ8IV13 435 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 PLD4Q96BZ4 506 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 CHMP6Q96FZ7 201 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 SGSM3Q96HU1 749 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 PHF7Q9BWX1 381 aaPredicted RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 GBA3Q9H227 469 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 CATSPERBQ9H7T0 1116 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 PPANQ9NQ55 473 aaKnown RBP15.41■□□□□ 0.06
SCAF11-204ENST00000395454 CFAP97Q9P2B7 532 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 THEGQ9P2T0 379 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 FAM50BQ9Y247 325 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 SH3BP1Q9Y3L3 701 aa15.41■□□□□ 0.06
SCAF11-204ENST00000395454 IGLV3-10A0A075B6K4 115 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 ALDH1A2O94788 518 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 APOEP02649 317 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 IL9P15248 144 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 PSMB4P28070 264 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 RING1Q06587 406 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 MTM1Q13496 603 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 PUS10Q3MIT2 529 aaKnown RBP15.4■□□□□ 0.06
SCAF11-204ENST00000395454 FAM182AQ5T1J6 154 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 SYCP2LQ5T4T6 812 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 UNC5AQ6ZN44 842 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 LRRC49Q8IUZ0 686 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 TDRD5Q8NAT2 981 aaKnown RBP15.4■□□□□ 0.06
SCAF11-204ENST00000395454 ADAMTS19Q8TE59 1207 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 DENND1AQ8TEH3 1009 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 FATE1Q969F0 183 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 NAT9Q9BTE0 207 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 TRABDQ9H4I3 376 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 ZFP14Q9HCL3 533 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 HS3ST4Q9Y661 456 aa15.4■□□□□ 0.06
SCAF11-204ENST00000395454 FAM47DPA6NHR8 397 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 FOXO6A8MYZ6 492 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 KCNK1O00180 336 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 TYROBPO43914 113 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 AP2A1O95782 977 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 CPP00450 1065 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 DRD4P21917 467 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 CCNCP24863 283 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 CORO1AP31146 461 aaKnown RBP15.39■□□□□ 0.05
SCAF11-204ENST00000395454 GRIA1P42261 906 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 MSH2P43246 934 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 MTA1Q13330 715 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 KBTBD12Q3ZCT8 623 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 TEX44Q53QW1 395 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 PIK3R6Q5UE93 754 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 DENND1CQ8IV53 801 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 CELF5Q8N6W0 485 aaKnown RBP15.39■□□□□ 0.05
SCAF11-204ENST00000395454 RTL3Q8N8U3 475 aaKnown RBP15.39■□□□□ 0.05
SCAF11-204ENST00000395454 NETO2Q8NC67 525 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 RIN3Q8TB24 985 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 TEKT5Q96M29 485 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 MOCS1Q9NZB8 636 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 PPARGC1AQ9UBK2 798 aaKnown RBP15.39■□□□□ 0.05
SCAF11-204ENST00000395454 LSM7Q9UK45 103 aaKnown RBP15.39■□□□□ 0.05
SCAF11-204ENST00000395454 ATXN2Q99700 1313 aaKnown RBP15.39■□□□□ 0.05
SCAF11-204ENST00000395454 CHD5Q8TDI0 1954 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 FAM159BA6NKW6 160 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 C2CD4DB7Z1M9 353 aa15.39■□□□□ 0.05
SCAF11-204ENST00000395454 WEE1P30291 646 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms