RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CPNE5Q9HCH3 593 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 MAN2B2Q9Y2E5 1009 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 C10orf71Q711Q0 1435 aa12.72□□□□□ -0.37
SLC28A1-203ENST00000394573 SLC16A3O15427 465 aaKnown RBP12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 SGTAO43765 313 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 KRT37O76014 449 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 P4HBP07237 508 aaKnown RBP12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 FAM86B2P0C5J1 330 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 TGFB3P10600 412 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 CHRNDQ07001 517 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 FSTL1Q12841 308 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 NFX1Q12986 1120 aaKnown RBP12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 PTPN20Q4JDL3 420 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 STEAP3Q658P3 488 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 TTBK2Q6IQ55 1244 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 ABRAXAS1Q6UWZ7 409 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 LYSMD2Q8IV50 215 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 C10orf107Q8IVU9 208 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 EID3Q8N140 333 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 VPS37AQ8NEZ2 397 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 DYNLL2Q96FJ2 89 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 GPN2Q9H9Y4 310 aaPredicted RBP12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 GPRC5CQ9NQ84 441 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 SEPT10Q9P0V9 454 aa12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 PHRF1Q9P1Y6 1649 aaKnown RBP12.71□□□□□ -0.37
SLC28A1-203ENST00000394573 MMP8P22894 467 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 HTR1BP28222 390 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 EVI2BP34910 448 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC12A3P55017 1021 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 TCEAL1Q15170 157 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 PITRM1Q5JRX3 1037 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 CCBE1Q6UXH8 406 aaPredicted RBP12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 ZNF438Q7Z4V0 828 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 ADCK1Q86TW2 530 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC26A11Q86WA9 606 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 SNX31Q8N9S9 440 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 RASSF5Q8WWW0 418 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 LPGAT1Q92604 370 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 HSFY1Q96LI6 401 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 PCIF1Q9H4Z3 704 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 MCCC2Q9HCC0 563 aa12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 FARSBQ9NSD9 589 aaKnown RBP12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.38
SLC28A1-203ENST00000394573 PRR23AA6NEV1 266 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 EVPLLA8MZ36 301 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 ZNF195O14628 629 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 ZNF254O75437 659 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 SEC14L2O76054 403 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 OR7A10O76100 309 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC4A1P02730 911 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 ATP5BP06576 529 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 CLEC2LP0C7M8 214 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 ARHGDIAP52565 204 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 IRF5Q13568 498 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 PUM3Q15397 648 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 DUSP7Q16829 419 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 ADAMTSL2Q86TH1 951 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 CAND1Q86VP6 1230 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 EPHX4Q8IUS5 362 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 ZNF781Q8N8C0 355 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 TTLQ8NG68 377 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 LMO3Q8TAP4 145 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 LRRC20Q8TCA0 184 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 GTF2H4Q92759 462 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 SH3KBP1Q96B97 665 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 CEP95Q96GE4 821 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 SMYD2Q9NRG4 433 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC17A6Q9P2U8 582 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 SNCAIPQ9Y6H5 919 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 TISP43B9A030 160 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 C9IYK1 514 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 H0YJX3 145 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 TGFBR1P36897 503 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 CBX5P45973 191 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 DBPQ10586 325 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 BNIP2Q12982 314 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 GRM4Q14833 912 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 GEN1Q17RS7 908 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 ZIK1Q3SY52 487 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 TOR2AQ5JU69 321 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 NXNL2Q5VZ03 156 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 SHEQ5VZ18 495 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 GTF2IRD2BQ6EKJ0 949 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 XAF1Q6GPH4 301 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 PMF1Q6P1K2 205 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 LAYNQ6UX15 382 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 PAGE2Q7Z2X7 111 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 HAUS6Q7Z4H7 955 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 GTF2IRD2Q86UP8 949 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 PPIL6Q8IXY8 311 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 PLPP6Q8IY26 295 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 CANT1Q8WVQ1 401 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 ST8SIA2Q92186 375 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 MARC2Q969Z3 335 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 TOE1Q96GM8 510 aaKnown RBP12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 SLC39A13Q96H72 371 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 SNX18Q96RF0 628 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 COPG2Q9UBF2 871 aa12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 PNMA8BQ9ULN7 279 aaPredicted RBP12.7□□□□□ -0.38
SLC28A1-203ENST00000394573 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms