RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 DSEQ9UL01 958 aa16.38■□□□□ 0.21
PCDH1-203ENST00000394536 SMIM28A0A1B0GU29 152 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 SLCO1B7G3V0H7 640 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 PSMD12O00232 456 aaPredicted RBP16.37■□□□□ 0.21
PCDH1-203ENST00000394536 CCL22O00626 93 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 CCDC166P0CW27 439 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 BDNFP23560 247 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 GRIA3P42263 894 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 PITRM1Q5JRX3 1037 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 NEPROQ6NW34 567 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 RMDN1Q96DB5 314 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 GAD1Q99259 594 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 R3HDMLQ9H3Y0 253 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 STRNO43815 780 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 GRM5P41594 1212 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 INSCQ1MX18 579 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 HFE2Q6ZVN8 426 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 FSTL5Q8N475 847 aaPredicted RBP16.37■□□□□ 0.21
PCDH1-203ENST00000394536 UBR7Q8N806 425 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 SENP8Q96LD8 212 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 DNAJC28Q9NX36 388 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 ABCA3Q99758 1704 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 GOLGA8CPA6NN73 597 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 H2AFYO75367 372 aaKnown RBP16.37■□□□□ 0.21
PCDH1-203ENST00000394536 RGS2P41220 211 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 MAXP61244 160 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 RPS27LQ71UM5 84 aaKnown RBP16.37■□□□□ 0.21
PCDH1-203ENST00000394536 LDB1Q86U70 411 aaPredicted RBP16.37■□□□□ 0.21
PCDH1-203ENST00000394536 NT5DC4Q86YG4 428 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 MIB1Q86YT6 1006 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 ACTRT2Q8TDY3 377 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 DGCR14Q96DF8 476 aaKnown RBP16.37■□□□□ 0.21
PCDH1-203ENST00000394536 C12orf42Q96LP6 360 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 DRC3Q9H069 523 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 ADNPQ9H2P0 1102 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 EGFL7Q9UHF1 273 aa16.37■□□□□ 0.21
PCDH1-203ENST00000394536 A0A1B0GVG6 124 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 ERI2A8K979 691 aaKnown RBP16.36■□□□□ 0.21
PCDH1-203ENST00000394536 NCAM2O15394 837 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 CHEK2O96017 543 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 PTPN3P26045 913 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 NAB1Q13506 487 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 ZFP1Q6P2D0 407 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 C16orf87Q6PH81 154 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 RNF217Q8TC41 542 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 ZMAT2Q96NC0 199 aaKnown RBP16.36■□□□□ 0.21
PCDH1-203ENST00000394536 PHF12Q96QT6 1004 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 UBE2OQ9C0C9 1292 aaKnown RBP16.36■□□□□ 0.21
PCDH1-203ENST00000394536 ALG9Q9H6U8 611 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 GPRC5DQ9NZD1 345 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 PABPN1LA6NDY0 278 aaKnown RBP16.36■□□□□ 0.21
PCDH1-203ENST00000394536 NFKBIEO00221 500 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 MAP3K13O43283 966 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 CABYRO75952 493 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 F9P00740 461 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 ZNF280AP59817 542 aaPredicted RBP16.36■□□□□ 0.21
PCDH1-203ENST00000394536 TSPY1Q01534 308 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 TBCELQ5QJ74 424 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 C6orf10Q5SRN2 563 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 ESRP1Q6NXG1 681 aaKnown RBP16.36■□□□□ 0.21
PCDH1-203ENST00000394536 B3GNT6Q6ZMB0 384 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 SEPHS2Q99611 448 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 C6orf203Q9P0P8 240 aaPredicted RBP16.36■□□□□ 0.21
PCDH1-203ENST00000394536 CNTN3Q9P232 1028 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 CROTQ9UKG9 612 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 INPP5AQ14642 412 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 TEX44Q53QW1 395 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 FBXO48Q5FWF7 155 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 OR52E8Q6IFG1 317 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 CLVS1Q8IUQ0 354 aaPredicted RBP16.36■□□□□ 0.21
PCDH1-203ENST00000394536 CDCA5Q96FF9 252 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 PIGVQ9NUD9 493 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 UTP6Q9NYH9 597 aaKnown RBP16.36■□□□□ 0.21
PCDH1-203ENST00000394536 VTI1BQ9UEU0 232 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 STK39Q9UEW8 545 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 TRHDEQ9UKU6 1024 aa16.36■□□□□ 0.21
PCDH1-203ENST00000394536 RRN3P2A6NIE6 340 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 YJEFN3A6XGL0 299 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 GSTA4O15217 222 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 ZBTB14O43829 449 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 BAIAP3O94812 1187 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 POMCP01189 267 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 MTX3Q5HYI7 312 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 OTUD3Q5T2D3 398 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-203ENST00000394536 DDI1Q8WTU0 396 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 SKA2Q8WVK7 121 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-203ENST00000394536 FCRL3Q96P31 734 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-203ENST00000394536 FTHL17Q9BXU8 183 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 TRIM15Q9C019 465 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 NOL11Q9H8H0 719 aaKnown RBP16.35■□□□□ 0.21
PCDH1-203ENST00000394536 MOCS1Q9NZB8 636 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 LAMB2P55268 1798 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 SMIM31A0A1B0GVY4 71 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 CAPN14A8MX76 684 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 SUPT3HB4E1H0 165 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 AP3B1O00203 1094 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 INPP4BO15327 924 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 AP2A1O95782 977 aa16.35■□□□□ 0.21
PCDH1-203ENST00000394536 CYP2B6P20813 491 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms