RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PNPT1Q8TCS8 783 aaKnown RBP19.15■□□□□ 0.66
HOXC6-202ENST00000394331 YTHDF1Q9BYJ9 559 aaKnown RBP19.15■□□□□ 0.66
HOXC6-202ENST00000394331 ZNF385DQ9H6B1 395 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 PEX10O60683 326 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 LRCH4O75427 683 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 OSBPP22059 807 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 ARRB2P32121 409 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 PPIL2Q13356 520 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 VGLL4Q14135 290 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 VASH1Q7L8A9 365 aaPredicted RBP19.15■□□□□ 0.66
HOXC6-202ENST00000394331 HPS1Q92902 700 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 SLC29A1Q99808 456 aa19.15■□□□□ 0.66
HOXC6-202ENST00000394331 GPN2Q9H9Y4 310 aaPredicted RBP19.15■□□□□ 0.66
HOXC6-202ENST00000394331 ZBTB42B2RXF5 422 aa19.14■□□□□ 0.66
HOXC6-202ENST00000394331 INO80B-WBP1J3KQ70 363 aa19.14■□□□□ 0.66
HOXC6-202ENST00000394331 SLC7A1P30825 629 aa19.14■□□□□ 0.66
HOXC6-202ENST00000394331 NME5P56597 212 aa19.14■□□□□ 0.66
HOXC6-202ENST00000394331 EIF3EP60228 445 aaKnown RBP19.14■□□□□ 0.66
HOXC6-202ENST00000394331 MROH9Q5TGP6 573 aa19.14■□□□□ 0.66
HOXC6-202ENST00000394331 GALNT18Q6P9A2 607 aa19.14■□□□□ 0.66
HOXC6-202ENST00000394331 ATP6V1E2Q96A05 226 aa19.14■□□□□ 0.66
HOXC6-202ENST00000394331 RPF1Q9H9Y2 349 aaKnown RBP19.14■□□□□ 0.66
HOXC6-202ENST00000394331 MAGEE1Q9HCI5 957 aa19.14■□□□□ 0.66
HOXC6-202ENST00000394331 TCF7L2Q9NQB0 619 aa19.14■□□□□ 0.66
HOXC6-202ENST00000394331 SAE1Q9UBE0 346 aaPredicted RBP19.14■□□□□ 0.66
HOXC6-202ENST00000394331 KLHL41O60662 606 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 CPNE6O95741 557 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 BCL10O95999 233 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 C7P10643 843 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 BMP2P12643 396 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 KDELR1P24390 212 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 TRAP1Q12931 704 aaKnown RBP19.14■□□□□ 0.65
HOXC6-202ENST00000394331 CELF3Q5SZQ8 465 aaKnown RBP19.14■□□□□ 0.65
HOXC6-202ENST00000394331 ZNF786Q8N393 782 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 CNTD1Q8N815 330 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 BCO2Q9BYV7 579 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 NANOGQ9H9S0 305 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 SLC22A1O15245 554 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 KRT19P08727 400 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 RALBP11234 206 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 DPP6P42658 865 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 SLC26A2P50443 739 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 PKNOX1P55347 436 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 OSTNP61366 133 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 HSDL1Q3SXM5 330 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 C10orf107Q8IVU9 208 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 TTC30BQ8N4P2 665 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 JOSD2Q8TAC2 188 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 LRTOMTQ8WZ04 291 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 FEM1CQ96JP0 617 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 EFHD1Q9BUP0 239 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 EFCAB1Q9HAE3 211 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 COPG2Q9UBF2 871 aa19.14■□□□□ 0.65
HOXC6-202ENST00000394331 DYNLT1P63172 113 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 SLC10A2Q12908 348 aaPredicted RBP19.13■□□□□ 0.65
HOXC6-202ENST00000394331 SF3B4Q15427 424 aaKnown RBP eCLIP19.13■□□□□ 0.65
HOXC6-202ENST00000394331 SLC9B1Q4ZJI4 515 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 RCN3Q96D15 328 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 WDR12Q9GZL7 423 aaKnown RBP19.13■□□□□ 0.65
HOXC6-202ENST00000394331 KLHL25Q9H0H3 589 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 RMND5AQ9H871 391 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 TNFSF13BQ9Y275 285 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 TCRBV3S1A0A5B6 114 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 C9IYK1 514 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 TCEA1P23193 301 aaKnown RBP19.13■□□□□ 0.65
HOXC6-202ENST00000394331 CA8P35219 290 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 SERPINB5P36952 375 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 TRAF2Q12933 501 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 TUBA3CQ13748 450 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 TRIM25Q14258 630 aaKnown RBP19.13■□□□□ 0.65
HOXC6-202ENST00000394331 SMTNL2Q2TAL5 461 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 MTX3Q5HYI7 312 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 INTS11Q5TA45 600 aaKnown RBP19.13■□□□□ 0.65
HOXC6-202ENST00000394331 UNC5AQ6ZN44 842 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 ARFGAP1Q8N6T3 406 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 OR13F1Q8NGS4 319 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 TRPV6Q9H1D0 765 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 ADAMTS10Q9H324 1103 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 SMARCAD1Q9H4L7 1026 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 CD320Q9NPF0 282 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 PAK5Q9P286 719 aa19.13■□□□□ 0.65
HOXC6-202ENST00000394331 CLDN25C9JDP6 229 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 ARIH2O95376 493 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 IL1R2P27930 398 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 GNA12Q03113 381 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 E2F2Q14209 437 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 FAM209AQ5JX71 171 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 LILRB4Q8NHJ6 448 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 FAF2Q96CS3 445 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 C8orf4Q9NR00 106 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 CYTH4Q9UIA0 394 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 CSADQ9Y600 493 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 DYTNA2CJ06 578 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 SLC15A5A6NIM6 579 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 CENPBD1B2RD01 187 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 AVILO75366 819 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 JRKO75564 520 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 PRKCGP05129 697 aa19.12■□□□□ 0.65
HOXC6-202ENST00000394331 ZNF182P17025 639 aaPredicted RBP19.12■□□□□ 0.65
HOXC6-202ENST00000394331 JUNBP17275 347 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms