RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 GJB5O95377 273 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 KRT16P08779 473 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 MYL2P10916 166 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 SLC2A3P11169 496 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 RHOQP17081 205 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 SERPINB3P29508 390 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 DSC2Q02487 901 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 TLE2Q04725 743 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 CTBP1Q13363 440 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 TTC7BQ86TV6 843 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 ARID3BQ8IVW6 561 aaPredicted RBP15.31■□□□□ 0.04
GPC3-202ENST00000394299 UMODL1-AS1Q8N2C9 162 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 GBP7Q8N8V2 638 aaPredicted RBP15.31■□□□□ 0.04
GPC3-202ENST00000394299 ATP6V0D2Q8N8Y2 350 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 BTN2A3PQ96KV6 586 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 KIFC1Q9BW19 673 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 ACSS2Q9NR19 701 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 STK38LQ9Y2H1 464 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 MAGEB16A2A368 324 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 WASH4PA8MWX3 477 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 ANXA9O76027 345 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 UNC5CO95185 931 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 RTN3O95197 1032 aaPredicted RBP15.31■□□□□ 0.04
GPC3-202ENST00000394299 SEC24AO95486 1093 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 NQO1P15559 274 aaKnown RBP15.31■□□□□ 0.04
GPC3-202ENST00000394299 ALDH7A1P49419 539 aaKnown RBP15.31■□□□□ 0.04
GPC3-202ENST00000394299 NRG1Q02297 640 aaPredicted RBP15.31■□□□□ 0.04
GPC3-202ENST00000394299 CCDC15Q0P6D6 951 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 MPP3Q13368 585 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 CNGA3Q16281 694 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 TRIM60Q495X7 471 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 PKN3Q6P5Z2 889 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 ANKS3Q6ZW76 656 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 ASRGL1Q7L266 308 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 C10orf107Q8IVU9 208 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 KLHDC8BQ8IXV7 354 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 APBB2Q92870 758 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 VWCEQ96DN2 955 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 TMEM248Q9NWD8 314 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 ZFP69BQ9UJL9 534 aa15.31■□□□□ 0.04
GPC3-202ENST00000394299 KLF11O14901 512 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 CCL5P13501 91 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 ARNTP27540 789 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 HTR7P34969 479 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 SPRP35270 261 aaPredicted RBP15.3■□□□□ 0.04
GPC3-202ENST00000394299 CD86P42081 329 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 LIMK2P53671 638 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 WNT3AP56704 352 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 OCRLQ01968 901 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 GRM3Q14832 879 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 RANBP10Q6VN20 620 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 LINC00523Q86TU6 105 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 PGBD5Q8N414 524 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 FSD1LQ9BXM9 530 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 ZNF212Q9UDV6 495 aa15.3■□□□□ 0.04
GPC3-202ENST00000394299 SCAMP3O14828 347 aaKnown RBP15.29■□□□□ 0.04
GPC3-202ENST00000394299 DCTN3O75935 186 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 AHSGP02765 367 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 FGF3P11487 239 aaPredicted RBP15.29■□□□□ 0.04
GPC3-202ENST00000394299 SLC6A4P31645 630 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 ARRB2P32121 409 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 AVPR1AP37288 418 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 GEMP55040 296 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 MPP1Q00013 466 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 STX3Q13277 289 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 NAB1Q13506 487 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 SEPT6Q14141 434 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 PCLAFQ15004 111 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 PCID2Q5JVF3 399 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 TIGD7Q6NT04 549 aaPredicted RBP15.29■□□□□ 0.04
GPC3-202ENST00000394299 SLC39A5Q6ZMH5 540 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 CLNKQ7Z7G1 428 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 ALYREFQ86V81 257 aaKnown RBP15.29■□□□□ 0.04
GPC3-202ENST00000394299 OR52K2Q8NGK3 314 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 ACMSDQ8TDX5 336 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 DIS3LQ8TF46 1054 aaKnown RBP15.29■□□□□ 0.04
GPC3-202ENST00000394299 SPATA17Q96L03 361 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 UNKQ9C0B0 810 aaKnown RBP15.29■□□□□ 0.04
GPC3-202ENST00000394299 CWH43Q9H720 699 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 GKN1Q9NS71 199 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 DCDC2Q9UHG0 476 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 SLC39A10Q9ULF5 831 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 IGLV3-10A0A075B6K4 115 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 A0A096LPK6 155 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.29■□□□□ 0.04
GPC3-202ENST00000394299 H7C4K7 107 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 CCL22O00626 93 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 DNAJC6O75061 913 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 GLRA3O75311 464 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 ZNF189O75820 626 aaPredicted RBP15.29■□□□□ 0.04
GPC3-202ENST00000394299 IGLV3-27P01718 113 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 PROCP04070 461 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 C2P06681 752 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 ZDHHC11BP0C7U3 371 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 OR1E1P30953 314 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 MNX1P50219 401 aaPredicted RBP15.29■□□□□ 0.04
GPC3-202ENST00000394299 ZNF460Q14592 562 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 MARC1Q5VT66 337 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 MBLAC2Q68D91 279 aa15.29■□□□□ 0.04
GPC3-202ENST00000394299 KYAT3Q6YP21 454 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms