RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 RHOQP17081 205 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 E2F5Q15329 346 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 ANO4Q32M45 955 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 SWT1Q5T5J6 900 aaKnown RBP26■■□□□ 1.75
SMARCD3-203ENST00000392811 FAM13CQ8NE31 585 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 MRGPRX2Q96LB1 330 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 ZYG11BQ9C0D3 744 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 ENTPD7Q9NQZ7 604 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26■■□□□ 1.75
SMARCD3-203ENST00000392811 NSMCE4AQ9NXX6 385 aa26■■□□□ 1.75
SMARCD3-203ENST00000392811 PPARGC1AQ9UBK2 798 aaKnown RBP26■■□□□ 1.75
SMARCD3-203ENST00000392811 MYLKQ15746 1914 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 KIF3CO14782 793 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 CNTN5O94779 1100 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 PEX11BO96011 259 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 GRK2P25098 689 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 SLC11A1P49279 550 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 GRM3Q14832 879 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 ALFQ53S48 1182 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 MIB1Q86YT6 1006 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 REM2Q8IYK8 340 aaPredicted RBP25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 TNS4Q8IZW8 715 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 PPHLN1Q8NEY8 458 aaKnown RBP25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 PIWIL2Q8TC59 973 aaKnown RBP25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 FSD1LQ9BXM9 530 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 CFHR5Q9BXR6 569 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 CRISPLD1Q9H336 500 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 CLIC5Q9NZA1 410 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 PHF24Q9UPV7 400 aa25.99■■□□□ 1.75
SMARCD3-203ENST00000392811 ALDH2P05091 517 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 RALBP11234 206 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 CALB2P22676 271 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 NDST2P52849 883 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 TAF10Q12962 218 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 TRIP4Q15650 581 aaPredicted RBP25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 DEFB115Q30KQ5 88 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 RSPO2Q6UXX9 243 aaPredicted RBP25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 ATG14Q6ZNE5 492 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 KDELC2Q7Z4H8 507 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 ZC3HC1Q86WB0 502 aaKnown RBP25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 CCDC117Q8IWD4 279 aaPredicted RBP25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 ATP6V0D2Q8N8Y2 350 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 HMCESQ96FZ2 354 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 GPR22Q99680 433 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 GPBP1L1Q9HC44 474 aaPredicted RBP25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 TMEM248Q9NWD8 314 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 SLC39A10Q9ULF5 831 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 TCAF1Q9Y4C2 921 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 MTMR11A4FU01 709 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 WFS1O76024 890 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 VNN2O95498 520 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 ARRB2P32121 409 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 CDK7P50613 346 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 RASIP1Q5U651 963 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 ESRP1Q6NXG1 681 aaKnown RBP25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 POTEHQ6S545 545 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 RANBP10Q6VN20 620 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 SORT1Q99523 831 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 SEPT5Q99719 369 aaPredicted RBP25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 EBF4Q9BQW3 602 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 BTBD10Q9BSF8 475 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 ATXN3LQ9H3M9 355 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 RHOJQ9H4E5 214 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 L3MBTL1Q9Y468 752 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 DOCK4Q8N1I0 1966 aa25.98■■□□□ 1.75
SMARCD3-203ENST00000392811 RTN3O95197 1032 aaPredicted RBP25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 VAPBO95292 243 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 ESRRAP11474 423 aaPredicted RBP25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 ITGA9Q13797 1035 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 MGAT5BQ3V5L5 792 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 RNF19BQ6ZMZ0 732 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 WDR75Q8IWA0 830 aaKnown RBP25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 BTN2A3PQ96KV6 586 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 SIKE1Q9BRV8 207 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 CADM1Q9BY67 442 aaKnown RBP25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 TLR8Q9NR97 1041 aaKnown RBP25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 MARCH2Q9P0N8 246 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 CAPN14A8MX76 684 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 J3KR12 359 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 HAPLN1P10915 354 aaPredicted RBP25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 CCND1P24385 295 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 GABRB3P28472 473 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 HADHAP40939 763 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 CHRNA4P43681 627 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 CSRP3P50461 194 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 HNRNPDQ14103 355 aaKnown RBP25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 C10orf120Q5SQS8 335 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 FUT10Q6P4F1 479 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 PTCD2Q8WV60 388 aaKnown RBP25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 IGSF8Q969P0 613 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 RILPQ96NA2 401 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 OLA1Q9NTK5 396 aaKnown RBP25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 SLC2A6Q9UGQ3 507 aa25.97■■□□□ 1.75
SMARCD3-203ENST00000392811 IGLV3-10A0A075B6K4 115 aa25.96■■□□□ 1.75
SMARCD3-203ENST00000392811 HMBSP08397 361 aa25.96■■□□□ 1.75
SMARCD3-203ENST00000392811 ARNTP27540 789 aa25.96■■□□□ 1.75
SMARCD3-203ENST00000392811 ARCN1P48444 511 aaKnown RBP25.96■■□□□ 1.75
SMARCD3-203ENST00000392811 WNT3AP56704 352 aa25.96■■□□□ 1.75
SMARCD3-203ENST00000392811 ABCE1P61221 599 aaKnown RBP25.96■■□□□ 1.75
SMARCD3-203ENST00000392811 GPR17Q13304 367 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms